Protein–RNA interactions for Protein: Q9C030

TRIM6, Tripartite motif-containing protein 6, humanhuman

Predicted RBP Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6Q9C030 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC21.52■■□□□ 1.04
TRIM6Q9C030 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC21.52■■□□□ 1.04
TRIM6Q9C030 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM6Q9C030 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.52■■□□□ 1.04
TRIM6Q9C030 TFP1-202ENST00000475455 1573 ntBASIC21.52■■□□□ 1.04
TRIM6Q9C030 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
TRIM6Q9C030 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
TRIM6Q9C030 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.52■■□□□ 1.03
TRIM6Q9C030 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
TRIM6Q9C030 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.52■■□□□ 1.03
TRIM6Q9C030 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.52■■□□□ 1.03
TRIM6Q9C030 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM6Q9C030 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM6Q9C030 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM6Q9C030 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM6Q9C030 AC073314.1-201ENST00000568729 2216 ntBASIC21.51■■□□□ 1.03
TRIM6Q9C030 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
TRIM6Q9C030 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
TRIM6Q9C030 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC21.51■■□□□ 1.03
TRIM6Q9C030 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
TRIM6Q9C030 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC21.51■■□□□ 1.03
TRIM6Q9C030 CD177P1-201ENST00000606252 935 ntBASIC21.51■■□□□ 1.03
TRIM6Q9C030 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC21.51■■□□□ 1.03
TRIM6Q9C030 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM6Q9C030 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM6Q9C030 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
TRIM6Q9C030 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.51■■□□□ 1.03
TRIM6Q9C030 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
TRIM6Q9C030 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.5■■□□□ 1.03
TRIM6Q9C030 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM6Q9C030 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM6Q9C030 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.5■■□□□ 1.03
TRIM6Q9C030 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM6Q9C030 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC21.5■■□□□ 1.03
TRIM6Q9C030 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM6Q9C030 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM6Q9C030 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM6Q9C030 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM6Q9C030 GXYLT1P3-201ENST00000453058 1193 ntBASIC21.5■■□□□ 1.03
TRIM6Q9C030 FDX2-207ENST00000494368 584 ntTSL 4 BASIC21.5■■□□□ 1.03
TRIM6Q9C030 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC21.5■■□□□ 1.03
TRIM6Q9C030 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC21.5■■□□□ 1.03
TRIM6Q9C030 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
TRIM6Q9C030 AC073195.1-201ENST00000607241 877 ntBASIC21.5■■□□□ 1.03
TRIM6Q9C030 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC21.5■■□□□ 1.03
TRIM6Q9C030 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC21.5■■□□□ 1.03
TRIM6Q9C030 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
TRIM6Q9C030 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM6Q9C030 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM6Q9C030 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
TRIM6Q9C030 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM6Q9C030 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
TRIM6Q9C030 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM6Q9C030 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.5■■□□□ 1.03
TRIM6Q9C030 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM6Q9C030 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21.5■■□□□ 1.03
TRIM6Q9C030 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
TRIM6Q9C030 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM6Q9C030 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.49■■□□□ 1.03
TRIM6Q9C030 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM6Q9C030 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM6Q9C030 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM6Q9C030 BX119927.1-201ENST00000636596 1552 ntBASIC21.49■■□□□ 1.03
TRIM6Q9C030 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM6Q9C030 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM6Q9C030 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM6Q9C030 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.49■■□□□ 1.03
TRIM6Q9C030 FAM197Y1-201ENST00000421178 764 ntBASIC21.49■■□□□ 1.03
TRIM6Q9C030 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM6Q9C030 AL355355.2-201ENST00000442321 338 ntBASIC21.49■■□□□ 1.03
TRIM6Q9C030 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM6Q9C030 AC026471.5-201ENST00000615068 467 ntBASIC21.49■■□□□ 1.03
TRIM6Q9C030 AC073912.3-201ENST00000624414 853 ntBASIC21.49■■□□□ 1.03
TRIM6Q9C030 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.49■■□□□ 1.03
TRIM6Q9C030 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
TRIM6Q9C030 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM6Q9C030 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
TRIM6Q9C030 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
TRIM6Q9C030 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
TRIM6Q9C030 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
TRIM6Q9C030 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC21.49■■□□□ 1.03
TRIM6Q9C030 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC21.49■■□□□ 1.03
TRIM6Q9C030 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM6Q9C030 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM6Q9C030 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM6Q9C030 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
TRIM6Q9C030 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.49■■□□□ 1.03
TRIM6Q9C030 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.48■■□□□ 1.03
TRIM6Q9C030 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.48■■□□□ 1.03
TRIM6Q9C030 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
TRIM6Q9C030 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM6Q9C030 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM6Q9C030 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC21.48■■□□□ 1.03
TRIM6Q9C030 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM6Q9C030 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM6Q9C030 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM6Q9C030 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM6Q9C030 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM6Q9C030 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
TRIM6Q9C030 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms