Protein–RNA interactions for Protein: Q96RV3

PCNX1, Pecanex-like protein 1, humanhuman

Predictions only

Length 2,341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1Q96RV3 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCNX1Q96RV3 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCNX1Q96RV3 HLA-G-202ENST00000376815 851 ntBASIC17.32■□□□□ 0.36
PCNX1Q96RV3 HLA-G-203ENST00000376818 1127 ntBASIC17.32■□□□□ 0.36
PCNX1Q96RV3 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCNX1Q96RV3 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.32■□□□□ 0.36
PCNX1Q96RV3 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.32■□□□□ 0.36
PCNX1Q96RV3 KRT18P56-201ENST00000507275 550 ntBASIC17.32■□□□□ 0.36
PCNX1Q96RV3 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.32■□□□□ 0.36
PCNX1Q96RV3 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.32■□□□□ 0.36
PCNX1Q96RV3 AP000692.2-201ENST00000608391 879 ntBASIC17.32■□□□□ 0.36
PCNX1Q96RV3 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCNX1Q96RV3 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCNX1Q96RV3 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCNX1Q96RV3 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCNX1Q96RV3 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCNX1Q96RV3 AC116351.2-201ENST00000606540 1585 ntBASIC17.31■□□□□ 0.36
PCNX1Q96RV3 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCNX1Q96RV3 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCNX1Q96RV3 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.31■□□□□ 0.36
PCNX1Q96RV3 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.31■□□□□ 0.36
PCNX1Q96RV3 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.31■□□□□ 0.36
PCNX1Q96RV3 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.31■□□□□ 0.36
PCNX1Q96RV3 SLC25A1P4-201ENST00000567977 778 ntBASIC17.31■□□□□ 0.36
PCNX1Q96RV3 AC011558.1-201ENST00000623459 338 ntBASIC17.31■□□□□ 0.36
PCNX1Q96RV3 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.31■□□□□ 0.36
PCNX1Q96RV3 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCNX1Q96RV3 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCNX1Q96RV3 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCNX1Q96RV3 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCNX1Q96RV3 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCNX1Q96RV3 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCNX1Q96RV3 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
PCNX1Q96RV3 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
PCNX1Q96RV3 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.31■□□□□ 0.36
PCNX1Q96RV3 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCNX1Q96RV3 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PCNX1Q96RV3 Z85996.1-201ENST00000494644 937 ntBASIC17.31■□□□□ 0.36
PCNX1Q96RV3 EGLN1P1-201ENST00000531623 762 ntBASIC17.31■□□□□ 0.36
PCNX1Q96RV3 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.31■□□□□ 0.36
PCNX1Q96RV3 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCNX1Q96RV3 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.31■□□□□ 0.36
PCNX1Q96RV3 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCNX1Q96RV3 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCNX1Q96RV3 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCNX1Q96RV3 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.3■□□□□ 0.36
PCNX1Q96RV3 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCNX1Q96RV3 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
PCNX1Q96RV3 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCNX1Q96RV3 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCNX1Q96RV3 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.3■□□□□ 0.36
PCNX1Q96RV3 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.3■□□□□ 0.36
PCNX1Q96RV3 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.3■□□□□ 0.36
PCNX1Q96RV3 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.3■□□□□ 0.36
PCNX1Q96RV3 AL138966.2-201ENST00000621997 464 ntBASIC17.3■□□□□ 0.36
PCNX1Q96RV3 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCNX1Q96RV3 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
PCNX1Q96RV3 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCNX1Q96RV3 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
PCNX1Q96RV3 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCNX1Q96RV3 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.3■□□□□ 0.36
PCNX1Q96RV3 AL049796.1-201ENST00000565336 1766 ntBASIC17.3■□□□□ 0.36
PCNX1Q96RV3 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCNX1Q96RV3 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PCNX1Q96RV3 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
PCNX1Q96RV3 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCNX1Q96RV3 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCNX1Q96RV3 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PCNX1Q96RV3 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCNX1Q96RV3 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.29■□□□□ 0.36
PCNX1Q96RV3 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.29■□□□□ 0.36
PCNX1Q96RV3 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC17.29■□□□□ 0.36
PCNX1Q96RV3 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCNX1Q96RV3 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCNX1Q96RV3 AL391422.3-201ENST00000603791 2761 ntBASIC17.29■□□□□ 0.36
PCNX1Q96RV3 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCNX1Q96RV3 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.29■□□□□ 0.36
PCNX1Q96RV3 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.29■□□□□ 0.36
PCNX1Q96RV3 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCNX1Q96RV3 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.29■□□□□ 0.36
PCNX1Q96RV3 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PCNX1Q96RV3 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.29■□□□□ 0.36
PCNX1Q96RV3 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCNX1Q96RV3 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCNX1Q96RV3 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCNX1Q96RV3 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.28■□□□□ 0.36
PCNX1Q96RV3 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCNX1Q96RV3 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PCNX1Q96RV3 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCNX1Q96RV3 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCNX1Q96RV3 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
PCNX1Q96RV3 DPP3P2-201ENST00000416030 1696 ntBASIC17.28■□□□□ 0.36
PCNX1Q96RV3 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.28■□□□□ 0.36
PCNX1Q96RV3 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.28■□□□□ 0.36
PCNX1Q96RV3 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCNX1Q96RV3 FAM207BP-201ENST00000447172 505 ntBASIC17.28■□□□□ 0.36
PCNX1Q96RV3 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.28■□□□□ 0.36
PCNX1Q96RV3 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.28■□□□□ 0.36
PCNX1Q96RV3 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.28■□□□□ 0.36
PCNX1Q96RV3 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms