Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
SPG11Q96JI7 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
SPG11Q96JI7 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SPG11Q96JI7 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SPG11Q96JI7 TSPY17P-201ENST00000450329 467 ntBASIC16.67■□□□□ 0.26
SPG11Q96JI7 HOMER2P1-201ENST00000455653 964 ntBASIC16.67■□□□□ 0.26
SPG11Q96JI7 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
SPG11Q96JI7 TFP1-202ENST00000475455 1573 ntBASIC16.67■□□□□ 0.26
SPG11Q96JI7 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC16.67■□□□□ 0.26
SPG11Q96JI7 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SPG11Q96JI7 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SPG11Q96JI7 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SPG11Q96JI7 KRT8P17-201ENST00000453110 1448 ntBASIC16.67■□□□□ 0.26
SPG11Q96JI7 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SPG11Q96JI7 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SPG11Q96JI7 HLA-G-202ENST00000376815 851 ntBASIC16.67■□□□□ 0.26
SPG11Q96JI7 HLA-G-203ENST00000376818 1127 ntBASIC16.67■□□□□ 0.26
SPG11Q96JI7 KRT18P16-201ENST00000510337 1294 ntBASIC16.67■□□□□ 0.26
SPG11Q96JI7 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.67■□□□□ 0.26
SPG11Q96JI7 AL023973.1-201ENST00000624619 620 ntBASIC16.67■□□□□ 0.26
SPG11Q96JI7 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SPG11Q96JI7 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SPG11Q96JI7 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC16.67■□□□□ 0.26
SPG11Q96JI7 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SPG11Q96JI7 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SPG11Q96JI7 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC16.66■□□□□ 0.26
SPG11Q96JI7 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SPG11Q96JI7 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.66■□□□□ 0.26
SPG11Q96JI7 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.66■□□□□ 0.26
SPG11Q96JI7 AC128688.1-201ENST00000487626 519 ntBASIC16.66■□□□□ 0.26
SPG11Q96JI7 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.66■□□□□ 0.26
SPG11Q96JI7 FBXW4P1-201ENST00000426721 2239 ntBASIC16.66■□□□□ 0.26
SPG11Q96JI7 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
SPG11Q96JI7 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SPG11Q96JI7 IER3-202ENST00000376377 1350 ntBASIC16.66■□□□□ 0.26
SPG11Q96JI7 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SPG11Q96JI7 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SPG11Q96JI7 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
SPG11Q96JI7 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
SPG11Q96JI7 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SPG11Q96JI7 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.66■□□□□ 0.26
SPG11Q96JI7 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
SPG11Q96JI7 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC16.66■□□□□ 0.26
SPG11Q96JI7 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SPG11Q96JI7 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SPG11Q96JI7 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.66■□□□□ 0.26
SPG11Q96JI7 GUSBP5-202ENST00000510805 1989 ntBASIC16.66■□□□□ 0.26
SPG11Q96JI7 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SPG11Q96JI7 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SPG11Q96JI7 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SPG11Q96JI7 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SPG11Q96JI7 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SPG11Q96JI7 AF106564.1-201ENST00000607058 2553 ntBASIC16.65■□□□□ 0.26
SPG11Q96JI7 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SPG11Q96JI7 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SPG11Q96JI7 KRT8P45-201ENST00000414328 1447 ntBASIC16.65■□□□□ 0.26
SPG11Q96JI7 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SPG11Q96JI7 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.65■□□□□ 0.26
SPG11Q96JI7 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.65■□□□□ 0.26
SPG11Q96JI7 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.65■□□□□ 0.26
SPG11Q96JI7 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.65■□□□□ 0.26
SPG11Q96JI7 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.65■□□□□ 0.26
SPG11Q96JI7 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SPG11Q96JI7 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.65■□□□□ 0.26
SPG11Q96JI7 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.65■□□□□ 0.26
SPG11Q96JI7 AC083849.1-201ENST00000615227 514 ntBASIC16.65■□□□□ 0.26
SPG11Q96JI7 AC141257.4-201ENST00000634557 245 ntBASIC16.65■□□□□ 0.26
SPG11Q96JI7 AC136944.6-201ENST00000634818 245 ntBASIC16.65■□□□□ 0.26
SPG11Q96JI7 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC16.65■□□□□ 0.26
SPG11Q96JI7 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SPG11Q96JI7 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.65■□□□□ 0.26
SPG11Q96JI7 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SPG11Q96JI7 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SPG11Q96JI7 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
SPG11Q96JI7 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SPG11Q96JI7 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SPG11Q96JI7 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC16.65■□□□□ 0.26
SPG11Q96JI7 PARN-205ENST00000539279 1557 ntTSL 2 BASIC16.65■□□□□ 0.26
SPG11Q96JI7 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SPG11Q96JI7 AL441883.1-201ENST00000566170 1045 ntBASIC16.65■□□□□ 0.26
SPG11Q96JI7 AL512604.3-201ENST00000569583 964 ntBASIC16.65■□□□□ 0.26
SPG11Q96JI7 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SPG11Q96JI7 AC011298.2-201ENST00000617989 482 ntBASIC16.65■□□□□ 0.26
SPG11Q96JI7 AC131212.4-201ENST00000623606 975 ntBASIC16.65■□□□□ 0.26
SPG11Q96JI7 AL031432.5-201ENST00000641059 760 ntBASIC16.65■□□□□ 0.26
SPG11Q96JI7 Z98882.1-201ENST00000622160 2253 ntBASIC16.65■□□□□ 0.26
SPG11Q96JI7 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SPG11Q96JI7 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC16.65■□□□□ 0.26
SPG11Q96JI7 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
SPG11Q96JI7 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.64■□□□□ 0.26
SPG11Q96JI7 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.26
SPG11Q96JI7 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SPG11Q96JI7 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.64■□□□□ 0.25
SPG11Q96JI7 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SPG11Q96JI7 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SPG11Q96JI7 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SPG11Q96JI7 TSPY21P-201ENST00000433481 731 ntBASIC16.64■□□□□ 0.25
SPG11Q96JI7 TSPY23P-201ENST00000440136 739 ntBASIC16.64■□□□□ 0.25
SPG11Q96JI7 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.64■□□□□ 0.25
SPG11Q96JI7 AL136038.3-201ENST00000561909 1096 ntBASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms