Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDH19Q8TAB3 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
PCDH19Q8TAB3 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PCDH19Q8TAB3 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDH19Q8TAB3 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.27■□□□□ 0.84
PCDH19Q8TAB3 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.27■□□□□ 0.84
PCDH19Q8TAB3 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.27■□□□□ 0.84
PCDH19Q8TAB3 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.27■□□□□ 0.84
PCDH19Q8TAB3 AC005332.7-201ENST00000614046 2005 ntBASIC20.27■□□□□ 0.84
PCDH19Q8TAB3 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDH19Q8TAB3 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PCDH19Q8TAB3 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PCDH19Q8TAB3 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PCDH19Q8TAB3 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
PCDH19Q8TAB3 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDH19Q8TAB3 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDH19Q8TAB3 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDH19Q8TAB3 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDH19Q8TAB3 KRT18P29-201ENST00000397031 1267 ntBASIC20.26■□□□□ 0.83
PCDH19Q8TAB3 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.26■□□□□ 0.83
PCDH19Q8TAB3 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
PCDH19Q8TAB3 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.26■□□□□ 0.83
PCDH19Q8TAB3 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.26■□□□□ 0.83
PCDH19Q8TAB3 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
PCDH19Q8TAB3 UNC93B4-201ENST00000505679 747 ntBASIC20.26■□□□□ 0.83
PCDH19Q8TAB3 UNC93B5-201ENST00000530315 699 ntBASIC20.26■□□□□ 0.83
PCDH19Q8TAB3 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.26■□□□□ 0.83
PCDH19Q8TAB3 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PCDH19Q8TAB3 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.26■□□□□ 0.83
PCDH19Q8TAB3 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.26■□□□□ 0.83
PCDH19Q8TAB3 ITM2C-210ENST00000620962 501 ntBASIC20.26■□□□□ 0.83
PCDH19Q8TAB3 AC066615.1-201ENST00000640911 628 ntBASIC20.26■□□□□ 0.83
PCDH19Q8TAB3 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDH19Q8TAB3 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDH19Q8TAB3 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDH19Q8TAB3 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.26■□□□□ 0.83
PCDH19Q8TAB3 Z82202.1-201ENST00000623446 1880 ntBASIC20.26■□□□□ 0.83
PCDH19Q8TAB3 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDH19Q8TAB3 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
PCDH19Q8TAB3 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDH19Q8TAB3 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDH19Q8TAB3 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDH19Q8TAB3 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDH19Q8TAB3 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
PCDH19Q8TAB3 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDH19Q8TAB3 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.25■□□□□ 0.83
PCDH19Q8TAB3 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.25■□□□□ 0.83
PCDH19Q8TAB3 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDH19Q8TAB3 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCDH19Q8TAB3 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDH19Q8TAB3 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
PCDH19Q8TAB3 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.25■□□□□ 0.83
PCDH19Q8TAB3 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.25■□□□□ 0.83
PCDH19Q8TAB3 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.25■□□□□ 0.83
PCDH19Q8TAB3 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDH19Q8TAB3 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.25■□□□□ 0.83
PCDH19Q8TAB3 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PCDH19Q8TAB3 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDH19Q8TAB3 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDH19Q8TAB3 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCDH19Q8TAB3 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDH19Q8TAB3 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDH19Q8TAB3 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDH19Q8TAB3 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
PCDH19Q8TAB3 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDH19Q8TAB3 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDH19Q8TAB3 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDH19Q8TAB3 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
PCDH19Q8TAB3 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.24■□□□□ 0.83
PCDH19Q8TAB3 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDH19Q8TAB3 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.24■□□□□ 0.83
PCDH19Q8TAB3 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.24■□□□□ 0.83
PCDH19Q8TAB3 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDH19Q8TAB3 AC008403.3-201ENST00000598924 454 ntBASIC20.24■□□□□ 0.83
PCDH19Q8TAB3 AL121906.2-201ENST00000621597 723 ntBASIC20.24■□□□□ 0.83
PCDH19Q8TAB3 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.24■□□□□ 0.83
PCDH19Q8TAB3 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.24■□□□□ 0.83
PCDH19Q8TAB3 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.24■□□□□ 0.83
PCDH19Q8TAB3 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
PCDH19Q8TAB3 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDH19Q8TAB3 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
PCDH19Q8TAB3 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDH19Q8TAB3 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.24■□□□□ 0.83
PCDH19Q8TAB3 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDH19Q8TAB3 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDH19Q8TAB3 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDH19Q8TAB3 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDH19Q8TAB3 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDH19Q8TAB3 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCDH19Q8TAB3 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDH19Q8TAB3 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.23■□□□□ 0.83
PCDH19Q8TAB3 ESRRAP1-201ENST00000400596 1257 ntBASIC20.23■□□□□ 0.83
PCDH19Q8TAB3 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.23■□□□□ 0.83
PCDH19Q8TAB3 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.23■□□□□ 0.83
PCDH19Q8TAB3 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.23■□□□□ 0.83
PCDH19Q8TAB3 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.23■□□□□ 0.83
PCDH19Q8TAB3 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.23■□□□□ 0.83
PCDH19Q8TAB3 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.23■□□□□ 0.83
PCDH19Q8TAB3 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.23■□□□□ 0.83
PCDH19Q8TAB3 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms