Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB43Q86YS6 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RAB43Q86YS6 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RAB43Q86YS6 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.72■□□□□ 0.59
RAB43Q86YS6 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RAB43Q86YS6 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB43Q86YS6 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.72■□□□□ 0.59
RAB43Q86YS6 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.72■□□□□ 0.59
RAB43Q86YS6 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RAB43Q86YS6 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RAB43Q86YS6 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.72■□□□□ 0.59
RAB43Q86YS6 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB43Q86YS6 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
RAB43Q86YS6 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
RAB43Q86YS6 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.72■□□□□ 0.59
RAB43Q86YS6 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB43Q86YS6 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.72■□□□□ 0.59
RAB43Q86YS6 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.72■□□□□ 0.59
RAB43Q86YS6 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB43Q86YS6 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.72■□□□□ 0.59
RAB43Q86YS6 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB43Q86YS6 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.71■□□□□ 0.59
RAB43Q86YS6 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB43Q86YS6 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.71■□□□□ 0.59
RAB43Q86YS6 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB43Q86YS6 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB43Q86YS6 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.71■□□□□ 0.59
RAB43Q86YS6 AL353807.1-201ENST00000427475 662 ntBASIC18.71■□□□□ 0.59
RAB43Q86YS6 KRT16P5-201ENST00000455284 522 ntBASIC18.71■□□□□ 0.59
RAB43Q86YS6 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.71■□□□□ 0.59
RAB43Q86YS6 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.71■□□□□ 0.59
RAB43Q86YS6 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.71■□□□□ 0.59
RAB43Q86YS6 REXO1L12P-201ENST00000622156 912 ntBASIC18.71■□□□□ 0.59
RAB43Q86YS6 AC113410.3-201ENST00000623366 203 ntBASIC18.71■□□□□ 0.59
RAB43Q86YS6 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.71■□□□□ 0.59
RAB43Q86YS6 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RAB43Q86YS6 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.71■□□□□ 0.59
RAB43Q86YS6 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RAB43Q86YS6 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.71■□□□□ 0.59
RAB43Q86YS6 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
RAB43Q86YS6 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.71■□□□□ 0.59
RAB43Q86YS6 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB43Q86YS6 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RAB43Q86YS6 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB43Q86YS6 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB43Q86YS6 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.71■□□□□ 0.59
RAB43Q86YS6 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.71■□□□□ 0.59
RAB43Q86YS6 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB43Q86YS6 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
RAB43Q86YS6 NBPF21P-201ENST00000425093 1451 ntBASIC18.71■□□□□ 0.59
RAB43Q86YS6 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.58
RAB43Q86YS6 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.58
RAB43Q86YS6 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB43Q86YS6 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
RAB43Q86YS6 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB43Q86YS6 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB43Q86YS6 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RAB43Q86YS6 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.7■□□□□ 0.58
RAB43Q86YS6 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RAB43Q86YS6 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RAB43Q86YS6 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.7■□□□□ 0.58
RAB43Q86YS6 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
RAB43Q86YS6 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.7■□□□□ 0.58
RAB43Q86YS6 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.7■□□□□ 0.58
RAB43Q86YS6 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.7■□□□□ 0.58
RAB43Q86YS6 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB43Q86YS6 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
RAB43Q86YS6 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RAB43Q86YS6 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RAB43Q86YS6 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RAB43Q86YS6 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.7■□□□□ 0.58
RAB43Q86YS6 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.7■□□□□ 0.58
RAB43Q86YS6 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB43Q86YS6 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB43Q86YS6 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB43Q86YS6 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RAB43Q86YS6 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB43Q86YS6 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.69■□□□□ 0.58
RAB43Q86YS6 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.69■□□□□ 0.58
RAB43Q86YS6 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.69■□□□□ 0.58
RAB43Q86YS6 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB43Q86YS6 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.69■□□□□ 0.58
RAB43Q86YS6 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB43Q86YS6 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RAB43Q86YS6 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RAB43Q86YS6 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB43Q86YS6 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RAB43Q86YS6 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB43Q86YS6 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
RAB43Q86YS6 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.69■□□□□ 0.58
RAB43Q86YS6 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.69■□□□□ 0.58
RAB43Q86YS6 BX088651.1-201ENST00000540551 451 ntBASIC18.69■□□□□ 0.58
RAB43Q86YS6 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.69■□□□□ 0.58
RAB43Q86YS6 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RAB43Q86YS6 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
RAB43Q86YS6 AC004264.1-201ENST00000608354 794 ntBASIC18.69■□□□□ 0.58
RAB43Q86YS6 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.69■□□□□ 0.58
RAB43Q86YS6 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB43Q86YS6 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RAB43Q86YS6 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms