Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC21.2■□□□□ 0.98
CNKSR3Q6P9H4 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CNKSR3Q6P9H4 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CNKSR3Q6P9H4 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CNKSR3Q6P9H4 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CNKSR3Q6P9H4 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CNKSR3Q6P9H4 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CNKSR3Q6P9H4 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CNKSR3Q6P9H4 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CNKSR3Q6P9H4 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CNKSR3Q6P9H4 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CNKSR3Q6P9H4 KRT18P48-201ENST00000434763 852 ntBASIC21.19■□□□□ 0.98
CNKSR3Q6P9H4 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
CNKSR3Q6P9H4 CA15P1-201ENST00000481698 905 ntBASIC21.19■□□□□ 0.98
CNKSR3Q6P9H4 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CNKSR3Q6P9H4 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC21.19■□□□□ 0.98
CNKSR3Q6P9H4 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC21.19■□□□□ 0.98
CNKSR3Q6P9H4 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.19■□□□□ 0.98
CNKSR3Q6P9H4 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.19■□□□□ 0.98
CNKSR3Q6P9H4 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CNKSR3Q6P9H4 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CNKSR3Q6P9H4 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC21.19■□□□□ 0.98
CNKSR3Q6P9H4 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CNKSR3Q6P9H4 IER3-202ENST00000376377 1350 ntBASIC21.19■□□□□ 0.98
CNKSR3Q6P9H4 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CNKSR3Q6P9H4 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CNKSR3Q6P9H4 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CNKSR3Q6P9H4 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CNKSR3Q6P9H4 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CNKSR3Q6P9H4 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CNKSR3Q6P9H4 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CNKSR3Q6P9H4 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CNKSR3Q6P9H4 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC21.18■□□□□ 0.98
CNKSR3Q6P9H4 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC21.18■□□□□ 0.98
CNKSR3Q6P9H4 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC21.18■□□□□ 0.98
CNKSR3Q6P9H4 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC21.18■□□□□ 0.98
CNKSR3Q6P9H4 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CNKSR3Q6P9H4 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC21.18■□□□□ 0.98
CNKSR3Q6P9H4 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC21.18■□□□□ 0.98
CNKSR3Q6P9H4 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
CNKSR3Q6P9H4 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
CNKSR3Q6P9H4 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC21.18■□□□□ 0.98
CNKSR3Q6P9H4 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.18■□□□□ 0.98
CNKSR3Q6P9H4 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CNKSR3Q6P9H4 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CNKSR3Q6P9H4 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.17■□□□□ 0.98
CNKSR3Q6P9H4 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
CNKSR3Q6P9H4 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CNKSR3Q6P9H4 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CNKSR3Q6P9H4 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CNKSR3Q6P9H4 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CNKSR3Q6P9H4 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CNKSR3Q6P9H4 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21.17■□□□□ 0.98
CNKSR3Q6P9H4 AL160286.2-201ENST00000567150 934 ntBASIC21.17■□□□□ 0.98
CNKSR3Q6P9H4 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC21.17■□□□□ 0.98
CNKSR3Q6P9H4 AL121894.2-201ENST00000602977 491 ntBASIC21.17■□□□□ 0.98
CNKSR3Q6P9H4 AC140113.3-201ENST00000605663 199 ntBASIC21.17■□□□□ 0.98
CNKSR3Q6P9H4 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC21.17■□□□□ 0.98
CNKSR3Q6P9H4 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CNKSR3Q6P9H4 EP400NL-214ENST00000641289 2402 ntBASIC21.17■□□□□ 0.98
CNKSR3Q6P9H4 AF106564.1-201ENST00000607058 2553 ntBASIC21.17■□□□□ 0.98
CNKSR3Q6P9H4 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CNKSR3Q6P9H4 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CNKSR3Q6P9H4 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
CNKSR3Q6P9H4 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CNKSR3Q6P9H4 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CNKSR3Q6P9H4 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
CNKSR3Q6P9H4 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CNKSR3Q6P9H4 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CNKSR3Q6P9H4 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC21.16■□□□□ 0.98
CNKSR3Q6P9H4 AL671277.2-201ENST00000458060 996 ntBASIC21.16■□□□□ 0.98
CNKSR3Q6P9H4 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC21.16■□□□□ 0.98
CNKSR3Q6P9H4 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC21.16■□□□□ 0.98
CNKSR3Q6P9H4 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC21.16■□□□□ 0.98
CNKSR3Q6P9H4 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC21.16■□□□□ 0.98
CNKSR3Q6P9H4 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CNKSR3Q6P9H4 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CNKSR3Q6P9H4 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.16■□□□□ 0.98
CNKSR3Q6P9H4 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CNKSR3Q6P9H4 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CNKSR3Q6P9H4 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CNKSR3Q6P9H4 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CNKSR3Q6P9H4 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.15■□□□□ 0.98
CNKSR3Q6P9H4 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC21.15■□□□□ 0.98
CNKSR3Q6P9H4 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CNKSR3Q6P9H4 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CNKSR3Q6P9H4 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CNKSR3Q6P9H4 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC21.15■□□□□ 0.98
CNKSR3Q6P9H4 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CNKSR3Q6P9H4 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CNKSR3Q6P9H4 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CNKSR3Q6P9H4 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CNKSR3Q6P9H4 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CNKSR3Q6P9H4 AL359075.1-203ENST00000462729 1002 ntBASIC21.15■□□□□ 0.98
CNKSR3Q6P9H4 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.15■□□□□ 0.98
CNKSR3Q6P9H4 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC21.15■□□□□ 0.98
CNKSR3Q6P9H4 AL441883.1-201ENST00000566170 1045 ntBASIC21.15■□□□□ 0.98
CNKSR3Q6P9H4 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC21.15■□□□□ 0.98
CNKSR3Q6P9H4 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC21.15■□□□□ 0.98
CNKSR3Q6P9H4 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms