Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CXCR4P61073 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CXCR4P61073 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CXCR4P61073 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.88■□□□□ 0.45
CXCR4P61073 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.88■□□□□ 0.45
CXCR4P61073 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC17.88■□□□□ 0.45
CXCR4P61073 TERF1P2-201ENST00000583350 1212 ntBASIC17.88■□□□□ 0.45
CXCR4P61073 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CXCR4P61073 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CXCR4P61073 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CXCR4P61073 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CXCR4P61073 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.88■□□□□ 0.45
CXCR4P61073 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.88■□□□□ 0.45
CXCR4P61073 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CXCR4P61073 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CXCR4P61073 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.88■□□□□ 0.45
CXCR4P61073 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CXCR4P61073 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CXCR4P61073 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CXCR4P61073 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CXCR4P61073 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CXCR4P61073 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CXCR4P61073 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CXCR4P61073 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.87■□□□□ 0.45
CXCR4P61073 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.87■□□□□ 0.45
CXCR4P61073 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.87■□□□□ 0.45
CXCR4P61073 PGM5P4-201ENST00000421970 445 ntBASIC17.87■□□□□ 0.45
CXCR4P61073 AC123595.1-201ENST00000440769 1046 ntBASIC17.87■□□□□ 0.45
CXCR4P61073 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.87■□□□□ 0.45
CXCR4P61073 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.87■□□□□ 0.45
CXCR4P61073 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.87■□□□□ 0.45
CXCR4P61073 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CXCR4P61073 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CXCR4P61073 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CXCR4P61073 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CXCR4P61073 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CXCR4P61073 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CXCR4P61073 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CXCR4P61073 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CXCR4P61073 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CXCR4P61073 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CXCR4P61073 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CXCR4P61073 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.86■□□□□ 0.45
CXCR4P61073 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CXCR4P61073 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CXCR4P61073 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CXCR4P61073 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CXCR4P61073 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.86■□□□□ 0.45
CXCR4P61073 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.86■□□□□ 0.45
CXCR4P61073 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CXCR4P61073 KRT16P6-202ENST00000425692 1426 ntBASIC17.86■□□□□ 0.45
CXCR4P61073 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CXCR4P61073 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CXCR4P61073 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CXCR4P61073 BICD1-207ENST00000551848 1962 ntBASIC17.86■□□□□ 0.45
CXCR4P61073 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CXCR4P61073 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CXCR4P61073 AIRN-201ENST00000601203 4374 ntBASIC17.86■□□□□ 0.45
CXCR4P61073 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CXCR4P61073 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CXCR4P61073 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CXCR4P61073 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CXCR4P61073 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CXCR4P61073 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.85■□□□□ 0.45
CXCR4P61073 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CXCR4P61073 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CXCR4P61073 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CXCR4P61073 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CXCR4P61073 KRT8P17-201ENST00000453110 1448 ntBASIC17.85■□□□□ 0.45
CXCR4P61073 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.85■□□□□ 0.45
CXCR4P61073 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.85■□□□□ 0.45
CXCR4P61073 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.85■□□□□ 0.45
CXCR4P61073 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.85■□□□□ 0.45
CXCR4P61073 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.85■□□□□ 0.45
CXCR4P61073 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CXCR4P61073 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC17.85■□□□□ 0.45
CXCR4P61073 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CXCR4P61073 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
CXCR4P61073 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CXCR4P61073 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CXCR4P61073 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CXCR4P61073 NOC2LP2-201ENST00000407594 1944 ntBASIC17.84■□□□□ 0.45
CXCR4P61073 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CXCR4P61073 AL031598.1-201ENST00000561511 1773 ntBASIC17.84■□□□□ 0.45
CXCR4P61073 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CXCR4P61073 PTBP1P-201ENST00000554374 1601 ntBASIC17.84■□□□□ 0.45
CXCR4P61073 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CXCR4P61073 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.84■□□□□ 0.45
CXCR4P61073 AC004854.2-201ENST00000608450 1441 ntBASIC17.84■□□□□ 0.45
CXCR4P61073 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CXCR4P61073 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.84■□□□□ 0.45
CXCR4P61073 JTB-203ENST00000368589 1216 ntTSL 2 BASIC17.84■□□□□ 0.45
CXCR4P61073 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CXCR4P61073 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.84■□□□□ 0.45
CXCR4P61073 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC17.84■□□□□ 0.45
CXCR4P61073 SLC7A5P1-201ENST00000568957 537 ntBASIC17.84■□□□□ 0.45
CXCR4P61073 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC17.84■□□□□ 0.45
CXCR4P61073 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CXCR4P61073 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CXCR4P61073 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms