Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
ACTBP60709 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ACTBP60709 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC16.84■□□□□ 0.29
ACTBP60709 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ACTBP60709 PGM5P4-201ENST00000421970 445 ntBASIC16.84■□□□□ 0.29
ACTBP60709 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ACTBP60709 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC16.84■□□□□ 0.29
ACTBP60709 TESC-206ENST00000541210 936 ntTSL 3 BASIC16.84■□□□□ 0.29
ACTBP60709 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC16.84■□□□□ 0.29
ACTBP60709 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC16.84■□□□□ 0.29
ACTBP60709 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ACTBP60709 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ACTBP60709 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
ACTBP60709 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ACTBP60709 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
ACTBP60709 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ACTBP60709 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC16.84■□□□□ 0.29
ACTBP60709 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ACTBP60709 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ACTBP60709 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.84■□□□□ 0.29
ACTBP60709 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC16.84■□□□□ 0.29
ACTBP60709 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.84■□□□□ 0.29
ACTBP60709 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ACTBP60709 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ACTBP60709 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ACTBP60709 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ACTBP60709 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ACTBP60709 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ACTBP60709 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ACTBP60709 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.83■□□□□ 0.28
ACTBP60709 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC16.83■□□□□ 0.28
ACTBP60709 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ACTBP60709 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
ACTBP60709 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ACTBP60709 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ACTBP60709 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
ACTBP60709 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ACTBP60709 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ACTBP60709 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ACTBP60709 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ACTBP60709 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC16.83■□□□□ 0.28
ACTBP60709 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC16.83■□□□□ 0.28
ACTBP60709 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ACTBP60709 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
ACTBP60709 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC16.83■□□□□ 0.28
ACTBP60709 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC16.83■□□□□ 0.28
ACTBP60709 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC16.83■□□□□ 0.28
ACTBP60709 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
ACTBP60709 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC16.83■□□□□ 0.28
ACTBP60709 AC104187.1-201ENST00000607510 612 ntBASIC16.83■□□□□ 0.28
ACTBP60709 MIR6821-201ENST00000617625 74 ntBASIC16.83■□□□□ 0.28
ACTBP60709 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ACTBP60709 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ACTBP60709 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ACTBP60709 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
ACTBP60709 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
ACTBP60709 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
ACTBP60709 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ACTBP60709 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ACTBP60709 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ACTBP60709 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ACTBP60709 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.82■□□□□ 0.28
ACTBP60709 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ACTBP60709 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.82■□□□□ 0.28
ACTBP60709 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ACTBP60709 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ACTBP60709 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC16.82■□□□□ 0.28
ACTBP60709 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ACTBP60709 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ACTBP60709 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC16.82■□□□□ 0.28
ACTBP60709 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ACTBP60709 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC16.82■□□□□ 0.28
ACTBP60709 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ACTBP60709 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ACTBP60709 AC034268.1-201ENST00000441047 882 ntBASIC16.82■□□□□ 0.28
ACTBP60709 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC16.82■□□□□ 0.28
ACTBP60709 AC010141.2-201ENST00000452426 721 ntBASIC16.82■□□□□ 0.28
ACTBP60709 PLD4-205ENST00000553861 667 ntTSL 2 BASIC16.82■□□□□ 0.28
ACTBP60709 DUX4L2-201ENST00000561772 1275 ntBASIC16.82■□□□□ 0.28
ACTBP60709 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC16.82■□□□□ 0.28
ACTBP60709 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC16.82■□□□□ 0.28
ACTBP60709 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC16.82■□□□□ 0.28
ACTBP60709 DUX4L6-201ENST00000626483 1275 ntBASIC16.82■□□□□ 0.28
ACTBP60709 DUX4L1-201ENST00000627662 1275 ntBASIC16.82■□□□□ 0.28
ACTBP60709 DUX4L8-201ENST00000629013 1275 ntBASIC16.82■□□□□ 0.28
ACTBP60709 DUX4L3-201ENST00000630187 1275 ntBASIC16.82■□□□□ 0.28
ACTBP60709 DUX4L7-201ENST00000630678 1275 ntBASIC16.82■□□□□ 0.28
ACTBP60709 DUX4L5-201ENST00000630834 1275 ntBASIC16.82■□□□□ 0.28
ACTBP60709 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
ACTBP60709 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ACTBP60709 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ACTBP60709 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ACTBP60709 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.82■□□□□ 0.28
ACTBP60709 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.82■□□□□ 0.28
ACTBP60709 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
ACTBP60709 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ACTBP60709 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ACTBP60709 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ACTBP60709 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ACTBP60709 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms