Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sssca1P56873 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sssca1P56873 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sssca1P56873 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sssca1P56873 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sssca1P56873 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.66□□□□□ -0.22
Sssca1P56873 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sssca1P56873 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sssca1P56873 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Sssca1P56873 Gm15375-201ENSMUST00000119510 849 ntBASIC13.66□□□□□ -0.22
Sssca1P56873 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Sssca1P56873 Gm18284-201ENSMUST00000172604 624 ntBASIC13.66□□□□□ -0.22
Sssca1P56873 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sssca1P56873 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sssca1P56873 Gm44672-201ENSMUST00000206944 1098 ntBASIC13.66□□□□□ -0.22
Sssca1P56873 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC13.66□□□□□ -0.22
Sssca1P56873 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Sssca1P56873 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Sssca1P56873 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sssca1P56873 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sssca1P56873 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sssca1P56873 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sssca1P56873 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sssca1P56873 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sssca1P56873 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sssca1P56873 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sssca1P56873 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.66□□□□□ -0.22
Sssca1P56873 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sssca1P56873 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sssca1P56873 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sssca1P56873 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC13.65□□□□□ -0.22
Sssca1P56873 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sssca1P56873 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sssca1P56873 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sssca1P56873 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.65□□□□□ -0.22
Sssca1P56873 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sssca1P56873 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC13.65□□□□□ -0.22
Sssca1P56873 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sssca1P56873 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC13.65□□□□□ -0.22
Sssca1P56873 Gm2559-201ENSMUST00000201323 363 ntBASIC13.65□□□□□ -0.22
Sssca1P56873 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sssca1P56873 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sssca1P56873 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sssca1P56873 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Sssca1P56873 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sssca1P56873 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Sssca1P56873 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sssca1P56873 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sssca1P56873 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC13.65□□□□□ -0.22
Sssca1P56873 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sssca1P56873 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sssca1P56873 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Sssca1P56873 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sssca1P56873 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sssca1P56873 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sssca1P56873 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.23
Sssca1P56873 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sssca1P56873 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Sssca1P56873 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sssca1P56873 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sssca1P56873 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sssca1P56873 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Sssca1P56873 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC13.64□□□□□ -0.23
Sssca1P56873 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sssca1P56873 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sssca1P56873 Gm5408-201ENSMUST00000197998 747 ntBASIC13.64□□□□□ -0.23
Sssca1P56873 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sssca1P56873 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sssca1P56873 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sssca1P56873 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Sssca1P56873 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sssca1P56873 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Sssca1P56873 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sssca1P56873 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sssca1P56873 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sssca1P56873 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sssca1P56873 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sssca1P56873 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Sssca1P56873 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sssca1P56873 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sssca1P56873 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sssca1P56873 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sssca1P56873 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sssca1P56873 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Sssca1P56873 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sssca1P56873 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sssca1P56873 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sssca1P56873 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sssca1P56873 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sssca1P56873 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sssca1P56873 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sssca1P56873 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sssca1P56873 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sssca1P56873 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sssca1P56873 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Sssca1P56873 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sssca1P56873 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sssca1P56873 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sssca1P56873 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Sssca1P56873 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms