Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CMC4P56277 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CMC4P56277 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CMC4P56277 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC14.63□□□□□ -0.07
CMC4P56277 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC14.63□□□□□ -0.07
CMC4P56277 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC14.63□□□□□ -0.07
CMC4P56277 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC14.63□□□□□ -0.07
CMC4P56277 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CMC4P56277 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
CMC4P56277 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC14.63□□□□□ -0.07
CMC4P56277 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC14.63□□□□□ -0.07
CMC4P56277 RHOD-202ENST00000532559 538 ntTSL 3 BASIC14.63□□□□□ -0.07
CMC4P56277 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC14.63□□□□□ -0.07
CMC4P56277 AC124016.1-201ENST00000609552 612 ntBASIC14.63□□□□□ -0.07
CMC4P56277 AL359736.2-201ENST00000621992 437 ntBASIC14.63□□□□□ -0.07
CMC4P56277 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC14.63□□□□□ -0.07
CMC4P56277 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CMC4P56277 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
CMC4P56277 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC14.63□□□□□ -0.07
CMC4P56277 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CMC4P56277 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CMC4P56277 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CMC4P56277 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CMC4P56277 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC14.63□□□□□ -0.07
CMC4P56277 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
CMC4P56277 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CMC4P56277 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CMC4P56277 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CMC4P56277 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CMC4P56277 AC099778.1-201ENST00000568593 1911 ntBASIC14.62□□□□□ -0.07
CMC4P56277 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC14.62□□□□□ -0.07
CMC4P56277 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
CMC4P56277 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CMC4P56277 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC14.62□□□□□ -0.07
CMC4P56277 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CMC4P56277 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CMC4P56277 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CMC4P56277 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CMC4P56277 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
CMC4P56277 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CMC4P56277 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC14.62□□□□□ -0.07
CMC4P56277 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CMC4P56277 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CMC4P56277 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC14.62□□□□□ -0.07
CMC4P56277 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC14.62□□□□□ -0.07
CMC4P56277 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CMC4P56277 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CMC4P56277 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CMC4P56277 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CMC4P56277 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CMC4P56277 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CMC4P56277 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CMC4P56277 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CMC4P56277 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CMC4P56277 AC124283.5-201ENST00000624661 1809 ntBASIC14.62□□□□□ -0.07
CMC4P56277 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CMC4P56277 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CMC4P56277 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CMC4P56277 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CMC4P56277 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CMC4P56277 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CMC4P56277 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC14.61□□□□□ -0.07
CMC4P56277 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CMC4P56277 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CMC4P56277 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CMC4P56277 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CMC4P56277 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CMC4P56277 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CMC4P56277 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CMC4P56277 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC14.61□□□□□ -0.07
CMC4P56277 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC14.61□□□□□ -0.07
CMC4P56277 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CMC4P56277 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CMC4P56277 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CMC4P56277 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
CMC4P56277 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CMC4P56277 MIR718-201ENST00000390190 70 ntBASIC14.61□□□□□ -0.07
CMC4P56277 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC14.61□□□□□ -0.07
CMC4P56277 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC14.61□□□□□ -0.07
CMC4P56277 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC14.61□□□□□ -0.07
CMC4P56277 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC14.61□□□□□ -0.07
CMC4P56277 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CMC4P56277 KRT18P16-201ENST00000510337 1294 ntBASIC14.61□□□□□ -0.07
CMC4P56277 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC14.61□□□□□ -0.07
CMC4P56277 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC14.61□□□□□ -0.07
CMC4P56277 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CMC4P56277 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC14.61□□□□□ -0.07
CMC4P56277 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CMC4P56277 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CMC4P56277 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC14.61□□□□□ -0.07
CMC4P56277 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CMC4P56277 USP39-204ENST00000409766 2033 ntTSL 2 BASIC14.61□□□□□ -0.07
CMC4P56277 GOLGA6L3-201ENST00000507199 1679 ntBASIC14.61□□□□□ -0.07
CMC4P56277 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CMC4P56277 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CMC4P56277 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CMC4P56277 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
CMC4P56277 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CMC4P56277 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
CMC4P56277 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms