Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
PDE1AP54750 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC24■■□□□ 1.43
PDE1AP54750 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC24■■□□□ 1.43
PDE1AP54750 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC24■■□□□ 1.43
PDE1AP54750 AP003097.1-201ENST00000530657 1135 ntBASIC24■■□□□ 1.43
PDE1AP54750 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC24■■□□□ 1.43
PDE1AP54750 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC24■■□□□ 1.43
PDE1AP54750 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC24■■□□□ 1.43
PDE1AP54750 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC24■■□□□ 1.43
PDE1AP54750 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC24■■□□□ 1.43
PDE1AP54750 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC24■■□□□ 1.43
PDE1AP54750 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PDE1AP54750 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
PDE1AP54750 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
PDE1AP54750 AP006587.1-201ENST00000534129 1502 ntBASIC24■■□□□ 1.43
PDE1AP54750 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PDE1AP54750 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC23.99■■□□□ 1.43
PDE1AP54750 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC23.99■■□□□ 1.43
PDE1AP54750 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PDE1AP54750 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PDE1AP54750 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC23.99■■□□□ 1.43
PDE1AP54750 THEM4-205ENST00000489410 643 ntTSL 2 BASIC23.99■■□□□ 1.43
PDE1AP54750 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
PDE1AP54750 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
PDE1AP54750 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
PDE1AP54750 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PDE1AP54750 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
PDE1AP54750 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
PDE1AP54750 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC23.99■■□□□ 1.43
PDE1AP54750 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PDE1AP54750 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
PDE1AP54750 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
PDE1AP54750 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC23.98■■□□□ 1.43
PDE1AP54750 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PDE1AP54750 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PDE1AP54750 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
PDE1AP54750 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
PDE1AP54750 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC23.98■■□□□ 1.43
PDE1AP54750 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC23.98■■□□□ 1.43
PDE1AP54750 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PDE1AP54750 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
PDE1AP54750 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PDE1AP54750 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
PDE1AP54750 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PDE1AP54750 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
PDE1AP54750 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
PDE1AP54750 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PDE1AP54750 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PDE1AP54750 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PDE1AP54750 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
PDE1AP54750 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PDE1AP54750 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC23.97■■□□□ 1.43
PDE1AP54750 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
PDE1AP54750 TREX2-204ENST00000370212 861 ntTSL 5 BASIC23.97■■□□□ 1.43
PDE1AP54750 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
PDE1AP54750 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC23.97■■□□□ 1.43
PDE1AP54750 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
PDE1AP54750 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC23.97■■□□□ 1.43
PDE1AP54750 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
PDE1AP54750 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PDE1AP54750 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PDE1AP54750 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC23.97■■□□□ 1.43
PDE1AP54750 AC026366.1-201ENST00000488803 879 ntBASIC23.97■■□□□ 1.43
PDE1AP54750 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC23.97■■□□□ 1.43
PDE1AP54750 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC23.97■■□□□ 1.43
PDE1AP54750 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PDE1AP54750 TBCB-214ENST00000629269 413 ntTSL 5 BASIC23.97■■□□□ 1.43
PDE1AP54750 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC23.96■■□□□ 1.43
PDE1AP54750 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC23.96■■□□□ 1.43
PDE1AP54750 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC23.96■■□□□ 1.43
PDE1AP54750 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PDE1AP54750 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC23.96■■□□□ 1.43
PDE1AP54750 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PDE1AP54750 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PDE1AP54750 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
PDE1AP54750 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
PDE1AP54750 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PDE1AP54750 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PDE1AP54750 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
PDE1AP54750 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PDE1AP54750 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC23.96■■□□□ 1.43
PDE1AP54750 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
PDE1AP54750 YBX1P10-201ENST00000444752 975 ntBASIC23.96■■□□□ 1.43
PDE1AP54750 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC23.96■■□□□ 1.43
PDE1AP54750 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
PDE1AP54750 AC233263.1-201ENST00000578059 224 ntBASIC23.96■■□□□ 1.43
PDE1AP54750 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PDE1AP54750 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC23.96■■□□□ 1.43
PDE1AP54750 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PDE1AP54750 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PDE1AP54750 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
PDE1AP54750 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC23.95■■□□□ 1.43
PDE1AP54750 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
PDE1AP54750 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
PDE1AP54750 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC23.95■■□□□ 1.43
PDE1AP54750 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC23.95■■□□□ 1.42
PDE1AP54750 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PDE1AP54750 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PDE1AP54750 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC23.95■■□□□ 1.42
PDE1AP54750 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms