Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
PMS2P54278 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.23■□□□□ 0.83
PMS2P54278 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PMS2P54278 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PMS2P54278 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
PMS2P54278 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
PMS2P54278 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PMS2P54278 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PMS2P54278 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PMS2P54278 AL355802.2-201ENST00000402069 882 ntBASIC20.23■□□□□ 0.83
PMS2P54278 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.23■□□□□ 0.83
PMS2P54278 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.23■□□□□ 0.83
PMS2P54278 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.23■□□□□ 0.83
PMS2P54278 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.23■□□□□ 0.83
PMS2P54278 AC011767.1-201ENST00000617410 1153 ntBASIC20.23■□□□□ 0.83
PMS2P54278 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
PMS2P54278 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.23■□□□□ 0.83
PMS2P54278 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PMS2P54278 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.23■□□□□ 0.83
PMS2P54278 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
PMS2P54278 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.23■□□□□ 0.83
PMS2P54278 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PMS2P54278 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PMS2P54278 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PMS2P54278 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PMS2P54278 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.22■□□□□ 0.83
PMS2P54278 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PMS2P54278 KRT8P17-201ENST00000453110 1448 ntBASIC20.22■□□□□ 0.83
PMS2P54278 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PMS2P54278 NCF1B-203ENST00000435988 1254 ntBASIC20.22■□□□□ 0.83
PMS2P54278 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.22■□□□□ 0.83
PMS2P54278 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PMS2P54278 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PMS2P54278 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.22■□□□□ 0.83
PMS2P54278 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PMS2P54278 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PMS2P54278 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.22■□□□□ 0.83
PMS2P54278 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PMS2P54278 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
PMS2P54278 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PMS2P54278 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.22■□□□□ 0.83
PMS2P54278 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
PMS2P54278 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PMS2P54278 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
PMS2P54278 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PMS2P54278 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PMS2P54278 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
PMS2P54278 AP001271.2-201ENST00000624018 1556 ntBASIC20.21■□□□□ 0.83
PMS2P54278 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PMS2P54278 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PMS2P54278 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
PMS2P54278 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PMS2P54278 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PMS2P54278 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PMS2P54278 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.21■□□□□ 0.83
PMS2P54278 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.21■□□□□ 0.83
PMS2P54278 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
PMS2P54278 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.21■□□□□ 0.83
PMS2P54278 MIR663A-201ENST00000385250 93 ntBASIC20.21■□□□□ 0.83
PMS2P54278 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.21■□□□□ 0.83
PMS2P54278 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.21■□□□□ 0.83
PMS2P54278 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PMS2P54278 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.21■□□□□ 0.83
PMS2P54278 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.21■□□□□ 0.83
PMS2P54278 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.21■□□□□ 0.83
PMS2P54278 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PMS2P54278 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PMS2P54278 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PMS2P54278 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
PMS2P54278 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
PMS2P54278 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PMS2P54278 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.21■□□□□ 0.83
PMS2P54278 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PMS2P54278 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PMS2P54278 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PMS2P54278 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.2■□□□□ 0.82
PMS2P54278 KRT16P6-202ENST00000425692 1426 ntBASIC20.2■□□□□ 0.82
PMS2P54278 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PMS2P54278 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PMS2P54278 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PMS2P54278 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.2■□□□□ 0.82
PMS2P54278 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PMS2P54278 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PMS2P54278 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PMS2P54278 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
PMS2P54278 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PMS2P54278 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PMS2P54278 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.2■□□□□ 0.82
PMS2P54278 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.2■□□□□ 0.82
PMS2P54278 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.2■□□□□ 0.82
PMS2P54278 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PMS2P54278 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PMS2P54278 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.2■□□□□ 0.82
PMS2P54278 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PMS2P54278 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
PMS2P54278 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.2■□□□□ 0.82
PMS2P54278 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
PMS2P54278 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.2■□□□□ 0.82
PMS2P54278 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.2■□□□□ 0.82
PMS2P54278 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms