Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.58■□□□□ 0.72
HMGCLP35914 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
HMGCLP35914 KRT18P16-201ENST00000510337 1294 ntBASIC19.58■□□□□ 0.72
HMGCLP35914 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.58■□□□□ 0.72
HMGCLP35914 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.58■□□□□ 0.72
HMGCLP35914 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.58■□□□□ 0.72
HMGCLP35914 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
HMGCLP35914 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.58■□□□□ 0.72
HMGCLP35914 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.58■□□□□ 0.72
HMGCLP35914 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HMGCLP35914 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
HMGCLP35914 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HMGCLP35914 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HMGCLP35914 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.58■□□□□ 0.72
HMGCLP35914 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HMGCLP35914 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.58■□□□□ 0.72
HMGCLP35914 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
HMGCLP35914 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.58■□□□□ 0.72
HMGCLP35914 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HMGCLP35914 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HMGCLP35914 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HMGCLP35914 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.57■□□□□ 0.72
HMGCLP35914 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.57■□□□□ 0.72
HMGCLP35914 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
HMGCLP35914 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.57■□□□□ 0.72
HMGCLP35914 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
HMGCLP35914 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HMGCLP35914 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
HMGCLP35914 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
HMGCLP35914 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HMGCLP35914 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.57■□□□□ 0.72
HMGCLP35914 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.57■□□□□ 0.72
HMGCLP35914 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HMGCLP35914 KRASP1-201ENST00000407852 552 ntBASIC19.57■□□□□ 0.72
HMGCLP35914 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.57■□□□□ 0.72
HMGCLP35914 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.57■□□□□ 0.72
HMGCLP35914 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.57■□□□□ 0.72
HMGCLP35914 C1QBPP2-201ENST00000528754 825 ntBASIC19.57■□□□□ 0.72
HMGCLP35914 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.57■□□□□ 0.72
HMGCLP35914 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.57■□□□□ 0.72
HMGCLP35914 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.57■□□□□ 0.72
HMGCLP35914 AC004264.1-201ENST00000608354 794 ntBASIC19.57■□□□□ 0.72
HMGCLP35914 AC110285.5-201ENST00000611501 352 ntBASIC19.57■□□□□ 0.72
HMGCLP35914 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HMGCLP35914 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
HMGCLP35914 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.57■□□□□ 0.72
HMGCLP35914 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.57■□□□□ 0.72
HMGCLP35914 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HMGCLP35914 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
HMGCLP35914 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
HMGCLP35914 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HMGCLP35914 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HMGCLP35914 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
HMGCLP35914 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HMGCLP35914 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HMGCLP35914 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HMGCLP35914 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.56■□□□□ 0.72
HMGCLP35914 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
HMGCLP35914 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.56■□□□□ 0.72
HMGCLP35914 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HMGCLP35914 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
HMGCLP35914 RPPH1-201ENST00000516869 333 ntBASIC19.56■□□□□ 0.72
HMGCLP35914 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
HMGCLP35914 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
HMGCLP35914 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.56■□□□□ 0.72
HMGCLP35914 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.56■□□□□ 0.72
HMGCLP35914 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
HMGCLP35914 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HMGCLP35914 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.56■□□□□ 0.72
HMGCLP35914 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HMGCLP35914 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.56■□□□□ 0.72
HMGCLP35914 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HMGCLP35914 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
HMGCLP35914 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
HMGCLP35914 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HMGCLP35914 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HMGCLP35914 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.55■□□□□ 0.72
HMGCLP35914 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HMGCLP35914 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
HMGCLP35914 TUBB8P6-201ENST00000436895 1288 ntBASIC19.55■□□□□ 0.72
HMGCLP35914 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.55■□□□□ 0.72
HMGCLP35914 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
HMGCLP35914 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HMGCLP35914 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
HMGCLP35914 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.55■□□□□ 0.72
HMGCLP35914 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.55■□□□□ 0.72
HMGCLP35914 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.55■□□□□ 0.72
HMGCLP35914 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
HMGCLP35914 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.55■□□□□ 0.72
HMGCLP35914 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HMGCLP35914 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
HMGCLP35914 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.54■□□□□ 0.72
HMGCLP35914 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HMGCLP35914 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.54■□□□□ 0.72
HMGCLP35914 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.54■□□□□ 0.72
HMGCLP35914 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HMGCLP35914 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HMGCLP35914 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HMGCLP35914 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HMGCLP35914 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms