Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
CLCN1P35523 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC22.27■■□□□ 1.16
CLCN1P35523 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC22.27■■□□□ 1.16
CLCN1P35523 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC22.27■■□□□ 1.16
CLCN1P35523 DUX4L2-201ENST00000561772 1275 ntBASIC22.27■■□□□ 1.16
CLCN1P35523 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
CLCN1P35523 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC22.27■■□□□ 1.16
CLCN1P35523 DUX4L6-201ENST00000626483 1275 ntBASIC22.27■■□□□ 1.16
CLCN1P35523 DUX4L1-201ENST00000627662 1275 ntBASIC22.27■■□□□ 1.16
CLCN1P35523 DUX4L8-201ENST00000629013 1275 ntBASIC22.27■■□□□ 1.16
CLCN1P35523 DUX4L3-201ENST00000630187 1275 ntBASIC22.27■■□□□ 1.16
CLCN1P35523 DUX4L7-201ENST00000630678 1275 ntBASIC22.27■■□□□ 1.16
CLCN1P35523 DUX4L5-201ENST00000630834 1275 ntBASIC22.27■■□□□ 1.16
CLCN1P35523 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CLCN1P35523 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CLCN1P35523 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
CLCN1P35523 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC22.27■■□□□ 1.16
CLCN1P35523 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
CLCN1P35523 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC22.27■■□□□ 1.15
CLCN1P35523 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC22.27■■□□□ 1.15
CLCN1P35523 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
CLCN1P35523 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
CLCN1P35523 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC22.26■■□□□ 1.15
CLCN1P35523 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CLCN1P35523 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CLCN1P35523 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CLCN1P35523 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC22.26■■□□□ 1.15
CLCN1P35523 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CLCN1P35523 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CLCN1P35523 AP001160.3-201ENST00000601484 763 ntBASIC22.26■■□□□ 1.15
CLCN1P35523 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
CLCN1P35523 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CLCN1P35523 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CLCN1P35523 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC22.26■■□□□ 1.15
CLCN1P35523 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
CLCN1P35523 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC22.26■■□□□ 1.15
CLCN1P35523 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CLCN1P35523 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CLCN1P35523 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CLCN1P35523 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CLCN1P35523 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CLCN1P35523 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CLCN1P35523 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
CLCN1P35523 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC22.25■■□□□ 1.15
CLCN1P35523 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
CLCN1P35523 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC22.25■■□□□ 1.15
CLCN1P35523 TESC-206ENST00000541210 936 ntTSL 3 BASIC22.25■■□□□ 1.15
CLCN1P35523 SLC7A5P2-201ENST00000553010 536 ntBASIC22.25■■□□□ 1.15
CLCN1P35523 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CLCN1P35523 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CLCN1P35523 AC090164.3-201ENST00000610780 2143 ntBASIC22.25■■□□□ 1.15
CLCN1P35523 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CLCN1P35523 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC22.25■■□□□ 1.15
CLCN1P35523 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CLCN1P35523 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CLCN1P35523 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CLCN1P35523 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC22.24■■□□□ 1.15
CLCN1P35523 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CLCN1P35523 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
CLCN1P35523 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC22.24■■□□□ 1.15
CLCN1P35523 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
CLCN1P35523 USP49-202ENST00000373010 2446 ntTSL 5 BASIC22.24■■□□□ 1.15
CLCN1P35523 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CLCN1P35523 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
CLCN1P35523 HACD1-201ENST00000326961 773 ntTSL 2 BASIC22.24■■□□□ 1.15
CLCN1P35523 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC22.24■■□□□ 1.15
CLCN1P35523 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC22.24■■□□□ 1.15
CLCN1P35523 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC22.24■■□□□ 1.15
CLCN1P35523 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CLCN1P35523 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CLCN1P35523 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
CLCN1P35523 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CLCN1P35523 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CLCN1P35523 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CLCN1P35523 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
CLCN1P35523 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC22.24■■□□□ 1.15
CLCN1P35523 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC22.24■■□□□ 1.15
CLCN1P35523 EXOC3-AS1-202ENST00000623673 1663 ntBASIC22.23■■□□□ 1.15
CLCN1P35523 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC22.23■■□□□ 1.15
CLCN1P35523 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC22.23■■□□□ 1.15
CLCN1P35523 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLCN1P35523 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLCN1P35523 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLCN1P35523 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC22.23■■□□□ 1.15
CLCN1P35523 AC067852.2-201ENST00000590513 2313 ntBASIC22.23■■□□□ 1.15
CLCN1P35523 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CLCN1P35523 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLCN1P35523 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLCN1P35523 AC097381.1-201ENST00000429019 1296 ntBASIC22.23■■□□□ 1.15
CLCN1P35523 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLCN1P35523 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC22.23■■□□□ 1.15
CLCN1P35523 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLCN1P35523 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLCN1P35523 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLCN1P35523 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLCN1P35523 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC22.23■■□□□ 1.15
CLCN1P35523 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLCN1P35523 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLCN1P35523 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC22.23■■□□□ 1.15
CLCN1P35523 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms