Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.98■□□□□ 0.47
SHC1P29353 BX323043.1-201ENST00000641006 1765 ntBASIC17.98■□□□□ 0.47
SHC1P29353 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.98■□□□□ 0.47
SHC1P29353 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.98■□□□□ 0.47
SHC1P29353 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
SHC1P29353 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SHC1P29353 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
SHC1P29353 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SHC1P29353 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SHC1P29353 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.97■□□□□ 0.47
SHC1P29353 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.97■□□□□ 0.47
SHC1P29353 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SHC1P29353 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SHC1P29353 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
SHC1P29353 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SHC1P29353 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.97■□□□□ 0.47
SHC1P29353 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SHC1P29353 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
SHC1P29353 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SHC1P29353 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SHC1P29353 HLA-G-202ENST00000376815 851 ntBASIC17.97■□□□□ 0.47
SHC1P29353 HLA-G-203ENST00000376818 1127 ntBASIC17.97■□□□□ 0.47
SHC1P29353 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
SHC1P29353 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
SHC1P29353 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.97■□□□□ 0.47
SHC1P29353 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.97■□□□□ 0.47
SHC1P29353 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SHC1P29353 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.97■□□□□ 0.47
SHC1P29353 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.97■□□□□ 0.47
SHC1P29353 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SHC1P29353 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
SHC1P29353 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.97■□□□□ 0.47
SHC1P29353 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.97■□□□□ 0.47
SHC1P29353 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.97■□□□□ 0.47
SHC1P29353 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.96■□□□□ 0.47
SHC1P29353 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SHC1P29353 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
SHC1P29353 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SHC1P29353 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.96■□□□□ 0.47
SHC1P29353 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SHC1P29353 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SHC1P29353 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.96■□□□□ 0.47
SHC1P29353 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.96■□□□□ 0.47
SHC1P29353 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SHC1P29353 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SHC1P29353 AC026366.1-201ENST00000488803 879 ntBASIC17.96■□□□□ 0.47
SHC1P29353 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.96■□□□□ 0.47
SHC1P29353 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.96■□□□□ 0.47
SHC1P29353 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SHC1P29353 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SHC1P29353 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SHC1P29353 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SHC1P29353 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SHC1P29353 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SHC1P29353 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SHC1P29353 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.96■□□□□ 0.47
SHC1P29353 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SHC1P29353 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHC1P29353 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.95■□□□□ 0.46
SHC1P29353 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHC1P29353 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHC1P29353 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHC1P29353 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHC1P29353 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
SHC1P29353 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SHC1P29353 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
SHC1P29353 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.95■□□□□ 0.46
SHC1P29353 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHC1P29353 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHC1P29353 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SHC1P29353 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
SHC1P29353 POU5F1P3-201ENST00000428824 1078 ntBASIC17.95■□□□□ 0.46
SHC1P29353 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHC1P29353 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.95■□□□□ 0.46
SHC1P29353 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.95■□□□□ 0.46
SHC1P29353 AC233263.1-201ENST00000578059 224 ntBASIC17.95■□□□□ 0.46
SHC1P29353 AC008687.6-201ENST00000596318 630 ntBASIC17.95■□□□□ 0.46
SHC1P29353 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHC1P29353 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.95■□□□□ 0.46
SHC1P29353 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHC1P29353 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHC1P29353 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHC1P29353 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.95■□□□□ 0.46
SHC1P29353 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHC1P29353 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.95■□□□□ 0.46
SHC1P29353 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SHC1P29353 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
SHC1P29353 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHC1P29353 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SHC1P29353 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
SHC1P29353 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.94■□□□□ 0.46
SHC1P29353 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SHC1P29353 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SHC1P29353 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SHC1P29353 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHC1P29353 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHC1P29353 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHC1P29353 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
SHC1P29353 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHC1P29353 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms