Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 FEM1AP1-201ENST00000431297 1995 ntBASIC16.6■□□□□ 0.25
COL8A2P25067 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
COL8A2P25067 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC16.6■□□□□ 0.25
COL8A2P25067 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
COL8A2P25067 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL8A2P25067 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC16.59■□□□□ 0.25
COL8A2P25067 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COL8A2P25067 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COL8A2P25067 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.59■□□□□ 0.25
COL8A2P25067 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC16.59■□□□□ 0.25
COL8A2P25067 AL512408.1-201ENST00000569378 2000 ntBASIC16.59■□□□□ 0.25
COL8A2P25067 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.59■□□□□ 0.25
COL8A2P25067 AL355355.2-201ENST00000442321 338 ntBASIC16.59■□□□□ 0.25
COL8A2P25067 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.59■□□□□ 0.25
COL8A2P25067 AL355075.4-201ENST00000554988 638 ntBASIC16.59■□□□□ 0.25
COL8A2P25067 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.59■□□□□ 0.25
COL8A2P25067 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.59■□□□□ 0.25
COL8A2P25067 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
COL8A2P25067 AC026471.5-201ENST00000615068 467 ntBASIC16.59■□□□□ 0.25
COL8A2P25067 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.59■□□□□ 0.25
COL8A2P25067 AC073912.3-201ENST00000624414 853 ntBASIC16.59■□□□□ 0.25
COL8A2P25067 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.59■□□□□ 0.25
COL8A2P25067 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC16.59■□□□□ 0.25
COL8A2P25067 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
COL8A2P25067 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC16.59■□□□□ 0.25
COL8A2P25067 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COL8A2P25067 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
COL8A2P25067 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
COL8A2P25067 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COL8A2P25067 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COL8A2P25067 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COL8A2P25067 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC16.59■□□□□ 0.25
COL8A2P25067 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
COL8A2P25067 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.25
COL8A2P25067 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.25
COL8A2P25067 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COL8A2P25067 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
COL8A2P25067 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COL8A2P25067 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.58■□□□□ 0.24
COL8A2P25067 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COL8A2P25067 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
COL8A2P25067 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.58■□□□□ 0.24
COL8A2P25067 BX088651.1-201ENST00000540551 451 ntBASIC16.58■□□□□ 0.24
COL8A2P25067 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.58■□□□□ 0.24
COL8A2P25067 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.58■□□□□ 0.24
COL8A2P25067 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.58■□□□□ 0.24
COL8A2P25067 CR392000.1-201ENST00000624770 1228 ntBASIC16.58■□□□□ 0.24
COL8A2P25067 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
COL8A2P25067 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
COL8A2P25067 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
COL8A2P25067 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
COL8A2P25067 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
COL8A2P25067 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
COL8A2P25067 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
COL8A2P25067 AP005212.1-201ENST00000581547 1997 ntBASIC16.58■□□□□ 0.24
COL8A2P25067 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
COL8A2P25067 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COL8A2P25067 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC16.58■□□□□ 0.24
COL8A2P25067 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COL8A2P25067 RNF165-205ENST00000588679 2904 ntBASIC16.57■□□□□ 0.24
COL8A2P25067 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC16.57■□□□□ 0.24
COL8A2P25067 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.57■□□□□ 0.24
COL8A2P25067 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
COL8A2P25067 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.57■□□□□ 0.24
COL8A2P25067 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.57■□□□□ 0.24
COL8A2P25067 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
COL8A2P25067 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
COL8A2P25067 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
COL8A2P25067 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COL8A2P25067 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.57■□□□□ 0.24
COL8A2P25067 AP003071.4-201ENST00000562276 1284 ntBASIC16.57■□□□□ 0.24
COL8A2P25067 AL353708.3-201ENST00000610272 989 ntBASIC16.57■□□□□ 0.24
COL8A2P25067 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COL8A2P25067 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
COL8A2P25067 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COL8A2P25067 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL8A2P25067 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC16.56■□□□□ 0.24
COL8A2P25067 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.56■□□□□ 0.24
COL8A2P25067 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
COL8A2P25067 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.56■□□□□ 0.24
COL8A2P25067 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
COL8A2P25067 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC16.56■□□□□ 0.24
COL8A2P25067 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL8A2P25067 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
COL8A2P25067 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
COL8A2P25067 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL8A2P25067 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC16.56■□□□□ 0.24
COL8A2P25067 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL8A2P25067 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.56■□□□□ 0.24
COL8A2P25067 AC211429.1-201ENST00000415277 523 ntBASIC16.56■□□□□ 0.24
COL8A2P25067 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL8A2P25067 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
COL8A2P25067 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.56■□□□□ 0.24
COL8A2P25067 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC16.56■□□□□ 0.24
COL8A2P25067 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.56■□□□□ 0.24
COL8A2P25067 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.56■□□□□ 0.24
COL8A2P25067 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
COL8A2P25067 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
COL8A2P25067 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
COL8A2P25067 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms