Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
ERCC2P18074 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ERCC2P18074 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ERCC2P18074 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.22■□□□□ 0.83
ERCC2P18074 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.22■□□□□ 0.83
ERCC2P18074 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
ERCC2P18074 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.22■□□□□ 0.83
ERCC2P18074 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
ERCC2P18074 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.22■□□□□ 0.83
ERCC2P18074 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ERCC2P18074 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.22■□□□□ 0.83
ERCC2P18074 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ERCC2P18074 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ERCC2P18074 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ERCC2P18074 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ERCC2P18074 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ERCC2P18074 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
ERCC2P18074 POU5F1P3-201ENST00000428824 1078 ntBASIC20.21■□□□□ 0.83
ERCC2P18074 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.21■□□□□ 0.83
ERCC2P18074 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ERCC2P18074 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.21■□□□□ 0.83
ERCC2P18074 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.21■□□□□ 0.83
ERCC2P18074 MTDHP1-201ENST00000605323 784 ntBASIC20.21■□□□□ 0.83
ERCC2P18074 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ERCC2P18074 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ERCC2P18074 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ERCC2P18074 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
ERCC2P18074 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
ERCC2P18074 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ERCC2P18074 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ERCC2P18074 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ERCC2P18074 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.21■□□□□ 0.83
ERCC2P18074 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ERCC2P18074 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ERCC2P18074 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ERCC2P18074 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ERCC2P18074 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ERCC2P18074 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.83
ERCC2P18074 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.2■□□□□ 0.82
ERCC2P18074 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
ERCC2P18074 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
ERCC2P18074 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ERCC2P18074 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.2■□□□□ 0.82
ERCC2P18074 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ERCC2P18074 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ERCC2P18074 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
ERCC2P18074 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
ERCC2P18074 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ERCC2P18074 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.2■□□□□ 0.82
ERCC2P18074 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.2■□□□□ 0.82
ERCC2P18074 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.2■□□□□ 0.82
ERCC2P18074 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.2■□□□□ 0.82
ERCC2P18074 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.2■□□□□ 0.82
ERCC2P18074 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.2■□□□□ 0.82
ERCC2P18074 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ERCC2P18074 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.2■□□□□ 0.82
ERCC2P18074 AC006058.3-201ENST00000606217 1069 ntBASIC20.2■□□□□ 0.82
ERCC2P18074 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ERCC2P18074 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.2■□□□□ 0.82
ERCC2P18074 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ERCC2P18074 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.2■□□□□ 0.82
ERCC2P18074 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.2■□□□□ 0.82
ERCC2P18074 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
ERCC2P18074 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.2■□□□□ 0.82
ERCC2P18074 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.2■□□□□ 0.82
ERCC2P18074 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.2■□□□□ 0.82
ERCC2P18074 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ERCC2P18074 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ERCC2P18074 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
ERCC2P18074 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ERCC2P18074 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
ERCC2P18074 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
ERCC2P18074 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ERCC2P18074 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ERCC2P18074 YBX1P10-201ENST00000444752 975 ntBASIC20.19■□□□□ 0.82
ERCC2P18074 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.19■□□□□ 0.82
ERCC2P18074 PRKY-204ENST00000533551 1019 ntBASIC20.19■□□□□ 0.82
ERCC2P18074 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ERCC2P18074 AC073648.6-201ENST00000641589 218 ntBASIC20.19■□□□□ 0.82
ERCC2P18074 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ERCC2P18074 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ERCC2P18074 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ERCC2P18074 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.19■□□□□ 0.82
ERCC2P18074 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.19■□□□□ 0.82
ERCC2P18074 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ERCC2P18074 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.19■□□□□ 0.82
ERCC2P18074 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ERCC2P18074 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ERCC2P18074 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ERCC2P18074 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ERCC2P18074 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.18■□□□□ 0.82
ERCC2P18074 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
ERCC2P18074 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ERCC2P18074 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.18■□□□□ 0.82
ERCC2P18074 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ERCC2P18074 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
ERCC2P18074 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.18■□□□□ 0.82
ERCC2P18074 TSPY20P-201ENST00000450910 630 ntBASIC20.18■□□□□ 0.82
ERCC2P18074 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.18■□□□□ 0.82
ERCC2P18074 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms