Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CCDC172P0C7W6 CDCA4P2-201ENST00000441182 718 ntBASIC21.18■□□□□ 0.98
CCDC172P0C7W6 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.18■□□□□ 0.98
CCDC172P0C7W6 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.18■□□□□ 0.98
CCDC172P0C7W6 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC172P0C7W6 PWWP2AP1-201ENST00000429776 2273 ntBASIC21.18■□□□□ 0.98
CCDC172P0C7W6 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC172P0C7W6 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.18■□□□□ 0.98
CCDC172P0C7W6 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.18■□□□□ 0.98
CCDC172P0C7W6 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC172P0C7W6 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC172P0C7W6 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC172P0C7W6 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CCDC172P0C7W6 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CCDC172P0C7W6 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21.17■□□□□ 0.98
CCDC172P0C7W6 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC172P0C7W6 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CCDC172P0C7W6 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.17■□□□□ 0.98
CCDC172P0C7W6 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC172P0C7W6 AL390719.1-204ENST00000412397 1219 ntBASIC21.17■□□□□ 0.98
CCDC172P0C7W6 BX276092.2-201ENST00000417668 665 ntBASIC21.17■□□□□ 0.98
CCDC172P0C7W6 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.17■□□□□ 0.98
CCDC172P0C7W6 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC21.17■□□□□ 0.98
CCDC172P0C7W6 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CCDC172P0C7W6 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.17■□□□□ 0.98
CCDC172P0C7W6 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.17■□□□□ 0.98
CCDC172P0C7W6 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC172P0C7W6 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC172P0C7W6 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC172P0C7W6 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC172P0C7W6 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC172P0C7W6 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC172P0C7W6 AC005332.7-201ENST00000614046 2005 ntBASIC21.17■□□□□ 0.98
CCDC172P0C7W6 AC093484.2-201ENST00000580996 2166 ntBASIC21.17■□□□□ 0.98
CCDC172P0C7W6 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC172P0C7W6 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC172P0C7W6 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC172P0C7W6 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CCDC172P0C7W6 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC172P0C7W6 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.16■□□□□ 0.98
CCDC172P0C7W6 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC172P0C7W6 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC172P0C7W6 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.16■□□□□ 0.98
CCDC172P0C7W6 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC172P0C7W6 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.16■□□□□ 0.98
CCDC172P0C7W6 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CCDC172P0C7W6 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC172P0C7W6 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
CCDC172P0C7W6 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC172P0C7W6 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC172P0C7W6 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
CCDC172P0C7W6 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.16■□□□□ 0.98
CCDC172P0C7W6 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.16■□□□□ 0.98
CCDC172P0C7W6 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC172P0C7W6 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC172P0C7W6 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.16■□□□□ 0.98
CCDC172P0C7W6 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.16■□□□□ 0.98
CCDC172P0C7W6 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC172P0C7W6 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC172P0C7W6 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC172P0C7W6 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC21.16■□□□□ 0.98
CCDC172P0C7W6 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
CCDC172P0C7W6 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC172P0C7W6 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC21.15■□□□□ 0.98
CCDC172P0C7W6 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC172P0C7W6 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC172P0C7W6 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC21.15■□□□□ 0.98
CCDC172P0C7W6 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC21.15■□□□□ 0.98
CCDC172P0C7W6 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC172P0C7W6 AC138932.1-201ENST00000534164 6830 ntBASIC21.15■□□□□ 0.98
CCDC172P0C7W6 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC21.15■□□□□ 0.98
CCDC172P0C7W6 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
CCDC172P0C7W6 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC172P0C7W6 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC172P0C7W6 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC172P0C7W6 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC21.15■□□□□ 0.98
CCDC172P0C7W6 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.15■□□□□ 0.98
CCDC172P0C7W6 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CCDC172P0C7W6 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CCDC172P0C7W6 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC172P0C7W6 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
CCDC172P0C7W6 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC172P0C7W6 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC172P0C7W6 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.15■□□□□ 0.98
CCDC172P0C7W6 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.15■□□□□ 0.98
CCDC172P0C7W6 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC172P0C7W6 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC172P0C7W6 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC172P0C7W6 BX323043.1-201ENST00000641006 1765 ntBASIC21.15■□□□□ 0.98
CCDC172P0C7W6 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC172P0C7W6 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CCDC172P0C7W6 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CCDC172P0C7W6 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
CCDC172P0C7W6 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
CCDC172P0C7W6 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.14■□□□□ 0.98
CCDC172P0C7W6 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC172P0C7W6 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC172P0C7W6 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC172P0C7W6 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC172P0C7W6 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms