Protein–RNA interactions for Protein: P04626

ERBB2, Receptor tyrosine-protein kinase erbB-2, humanhuman

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2P04626 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
ERBB2P04626 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ERBB2P04626 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
ERBB2P04626 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ERBB2P04626 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
ERBB2P04626 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
ERBB2P04626 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.65■□□□□ 0.9
ERBB2P04626 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ERBB2P04626 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ERBB2P04626 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
ERBB2P04626 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.65■□□□□ 0.9
ERBB2P04626 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.65■□□□□ 0.9
ERBB2P04626 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ERBB2P04626 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ERBB2P04626 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.65■□□□□ 0.9
ERBB2P04626 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ERBB2P04626 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.65■□□□□ 0.9
ERBB2P04626 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
ERBB2P04626 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ERBB2P04626 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ERBB2P04626 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
ERBB2P04626 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.65■□□□□ 0.9
ERBB2P04626 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.65■□□□□ 0.9
ERBB2P04626 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ERBB2P04626 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
ERBB2P04626 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
ERBB2P04626 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ERBB2P04626 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ERBB2P04626 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
ERBB2P04626 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.64■□□□□ 0.9
ERBB2P04626 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
ERBB2P04626 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.9
ERBB2P04626 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.64■□□□□ 0.89
ERBB2P04626 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
ERBB2P04626 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ERBB2P04626 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ERBB2P04626 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
ERBB2P04626 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.64■□□□□ 0.89
ERBB2P04626 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ERBB2P04626 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ERBB2P04626 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ERBB2P04626 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ERBB2P04626 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.64■□□□□ 0.89
ERBB2P04626 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ERBB2P04626 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
ERBB2P04626 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
ERBB2P04626 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ERBB2P04626 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ERBB2P04626 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.64■□□□□ 0.89
ERBB2P04626 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.64■□□□□ 0.89
ERBB2P04626 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ERBB2P04626 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ERBB2P04626 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.63■□□□□ 0.89
ERBB2P04626 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ERBB2P04626 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
ERBB2P04626 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ERBB2P04626 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.63■□□□□ 0.89
ERBB2P04626 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ERBB2P04626 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ERBB2P04626 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ERBB2P04626 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.63■□□□□ 0.89
ERBB2P04626 YBX1P10-201ENST00000444752 975 ntBASIC20.63■□□□□ 0.89
ERBB2P04626 AC128676.1-201ENST00000454392 318 ntBASIC20.63■□□□□ 0.89
ERBB2P04626 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ERBB2P04626 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.63■□□□□ 0.89
ERBB2P04626 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.63■□□□□ 0.89
ERBB2P04626 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.63■□□□□ 0.89
ERBB2P04626 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.63■□□□□ 0.89
ERBB2P04626 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ERBB2P04626 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ERBB2P04626 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ERBB2P04626 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ERBB2P04626 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ERBB2P04626 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ERBB2P04626 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.62■□□□□ 0.89
ERBB2P04626 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
ERBB2P04626 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.62■□□□□ 0.89
ERBB2P04626 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ERBB2P04626 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.62■□□□□ 0.89
ERBB2P04626 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.62■□□□□ 0.89
ERBB2P04626 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.62■□□□□ 0.89
ERBB2P04626 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.62■□□□□ 0.89
ERBB2P04626 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.62■□□□□ 0.89
ERBB2P04626 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.62■□□□□ 0.89
ERBB2P04626 AL023875.1-201ENST00000640777 796 ntBASIC20.62■□□□□ 0.89
ERBB2P04626 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ERBB2P04626 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
ERBB2P04626 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.62■□□□□ 0.89
ERBB2P04626 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.62■□□□□ 0.89
ERBB2P04626 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ERBB2P04626 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.61■□□□□ 0.89
ERBB2P04626 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ERBB2P04626 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
ERBB2P04626 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.61■□□□□ 0.89
ERBB2P04626 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ERBB2P04626 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ERBB2P04626 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ERBB2P04626 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.61■□□□□ 0.89
ERBB2P04626 PRKY-204ENST00000533551 1019 ntBASIC20.61■□□□□ 0.89
ERBB2P04626 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms