Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 DET1-207ENST00000564406 2315 ntTSL 2 BASIC22.08■■□□□ 1.12
GGPS1O95749 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
GGPS1O95749 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
GGPS1O95749 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
GGPS1O95749 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
GGPS1O95749 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
GGPS1O95749 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC22.07■■□□□ 1.12
GGPS1O95749 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
GGPS1O95749 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
GGPS1O95749 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
GGPS1O95749 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC22.07■■□□□ 1.12
GGPS1O95749 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
GGPS1O95749 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
GGPS1O95749 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC22.07■■□□□ 1.12
GGPS1O95749 PPOX-219ENST00000544598 813 ntTSL 2 BASIC22.07■■□□□ 1.12
GGPS1O95749 MIR6786-201ENST00000616843 113 ntBASIC22.07■■□□□ 1.12
GGPS1O95749 GLDC-219ENST00000640208 420 ntTSL 2 BASIC22.07■■□□□ 1.12
GGPS1O95749 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
GGPS1O95749 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
GGPS1O95749 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
GGPS1O95749 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
GGPS1O95749 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
GGPS1O95749 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
GGPS1O95749 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
GGPS1O95749 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
GGPS1O95749 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
GGPS1O95749 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
GGPS1O95749 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
GGPS1O95749 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
GGPS1O95749 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
GGPS1O95749 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
GGPS1O95749 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
GGPS1O95749 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
GGPS1O95749 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC22.06■■□□□ 1.12
GGPS1O95749 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
GGPS1O95749 RCN1P1-201ENST00000400413 996 ntBASIC22.06■■□□□ 1.12
GGPS1O95749 MESTP1-201ENST00000404287 994 ntBASIC22.06■■□□□ 1.12
GGPS1O95749 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC22.06■■□□□ 1.12
GGPS1O95749 MIR1224-201ENST00000408193 85 ntBASIC22.06■■□□□ 1.12
GGPS1O95749 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC22.06■■□□□ 1.12
GGPS1O95749 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC22.06■■□□□ 1.12
GGPS1O95749 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC22.06■■□□□ 1.12
GGPS1O95749 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
GGPS1O95749 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC22.06■■□□□ 1.12
GGPS1O95749 AL157384.1-201ENST00000445995 2473 ntBASIC22.06■■□□□ 1.12
GGPS1O95749 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
GGPS1O95749 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
GGPS1O95749 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
GGPS1O95749 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
GGPS1O95749 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
GGPS1O95749 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
GGPS1O95749 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
GGPS1O95749 CD37-204ENST00000535669 1674 ntTSL 2 BASIC22.05■■□□□ 1.12
GGPS1O95749 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
GGPS1O95749 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
GGPS1O95749 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
GGPS1O95749 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
GGPS1O95749 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC22.05■■□□□ 1.12
GGPS1O95749 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
GGPS1O95749 FITM1-202ENST00000559294 800 ntBASIC22.05■■□□□ 1.12
GGPS1O95749 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC22.05■■□□□ 1.12
GGPS1O95749 AC026271.3-201ENST00000571884 352 ntBASIC22.05■■□□□ 1.12
GGPS1O95749 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
GGPS1O95749 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
GGPS1O95749 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC22.05■■□□□ 1.12
GGPS1O95749 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
GGPS1O95749 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
GGPS1O95749 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
GGPS1O95749 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC22.05■■□□□ 1.12
GGPS1O95749 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
GGPS1O95749 AC004980.1-204ENST00000429707 299 ntBASIC22.04■■□□□ 1.12
GGPS1O95749 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
GGPS1O95749 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC22.04■■□□□ 1.12
GGPS1O95749 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC22.04■■□□□ 1.12
GGPS1O95749 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC22.04■■□□□ 1.12
GGPS1O95749 TMEM179-206ENST00000616017 1645 ntBASIC22.04■■□□□ 1.12
GGPS1O95749 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
GGPS1O95749 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
GGPS1O95749 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC22.04■■□□□ 1.12
GGPS1O95749 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
GGPS1O95749 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC22.03■■□□□ 1.12
GGPS1O95749 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
GGPS1O95749 FSCN1P1-201ENST00000568912 1481 ntBASIC22.03■■□□□ 1.12
GGPS1O95749 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
GGPS1O95749 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
GGPS1O95749 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC22.03■■□□□ 1.12
GGPS1O95749 MOK-225ENST00000522867 1883 ntTSL 5 BASIC22.03■■□□□ 1.12
GGPS1O95749 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
GGPS1O95749 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
GGPS1O95749 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
GGPS1O95749 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
GGPS1O95749 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
GGPS1O95749 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
GGPS1O95749 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
GGPS1O95749 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC22.03■■□□□ 1.12
GGPS1O95749 AC145285.6-201ENST00000604632 637 ntBASIC22.03■■□□□ 1.12
GGPS1O95749 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
GGPS1O95749 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
GGPS1O95749 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC22.03■■□□□ 1.12
GGPS1O95749 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC22.03■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms