Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMX2-CTNND1H3BSU7 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMX2-CTNND1H3BSU7 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.28■□□□□ 0.68
TMX2-CTNND1H3BSU7 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMX2-CTNND1H3BSU7 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMX2-CTNND1H3BSU7 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMX2-CTNND1H3BSU7 AP005212.1-201ENST00000581547 1997 ntBASIC19.28■□□□□ 0.68
TMX2-CTNND1H3BSU7 NBPF21P-201ENST00000425093 1451 ntBASIC19.28■□□□□ 0.68
TMX2-CTNND1H3BSU7 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
TMX2-CTNND1H3BSU7 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMX2-CTNND1H3BSU7 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.27■□□□□ 0.68
TMX2-CTNND1H3BSU7 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TMX2-CTNND1H3BSU7 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.27■□□□□ 0.68
TMX2-CTNND1H3BSU7 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMX2-CTNND1H3BSU7 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TMX2-CTNND1H3BSU7 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMX2-CTNND1H3BSU7 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TMX2-CTNND1H3BSU7 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMX2-CTNND1H3BSU7 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TMX2-CTNND1H3BSU7 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMX2-CTNND1H3BSU7 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
TMX2-CTNND1H3BSU7 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMX2-CTNND1H3BSU7 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TMX2-CTNND1H3BSU7 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.27■□□□□ 0.68
TMX2-CTNND1H3BSU7 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
TMX2-CTNND1H3BSU7 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.27■□□□□ 0.68
TMX2-CTNND1H3BSU7 AF186192.3-201ENST00000583427 947 ntBASIC19.27■□□□□ 0.68
TMX2-CTNND1H3BSU7 AC097493.4-201ENST00000641197 219 ntBASIC19.27■□□□□ 0.68
TMX2-CTNND1H3BSU7 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.27■□□□□ 0.68
TMX2-CTNND1H3BSU7 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMX2-CTNND1H3BSU7 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.27■□□□□ 0.68
TMX2-CTNND1H3BSU7 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.27■□□□□ 0.67
TMX2-CTNND1H3BSU7 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TMX2-CTNND1H3BSU7 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.27■□□□□ 0.67
TMX2-CTNND1H3BSU7 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
TMX2-CTNND1H3BSU7 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TMX2-CTNND1H3BSU7 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
TMX2-CTNND1H3BSU7 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
TMX2-CTNND1H3BSU7 HTR7P1-201ENST00000538670 1336 ntBASIC19.26■□□□□ 0.67
TMX2-CTNND1H3BSU7 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMX2-CTNND1H3BSU7 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.26■□□□□ 0.67
TMX2-CTNND1H3BSU7 KRT8P36-201ENST00000489121 1440 ntBASIC19.26■□□□□ 0.67
TMX2-CTNND1H3BSU7 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMX2-CTNND1H3BSU7 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.26■□□□□ 0.67
TMX2-CTNND1H3BSU7 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
TMX2-CTNND1H3BSU7 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.26■□□□□ 0.67
TMX2-CTNND1H3BSU7 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.26■□□□□ 0.67
TMX2-CTNND1H3BSU7 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMX2-CTNND1H3BSU7 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.26■□□□□ 0.67
TMX2-CTNND1H3BSU7 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMX2-CTNND1H3BSU7 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.26■□□□□ 0.67
TMX2-CTNND1H3BSU7 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMX2-CTNND1H3BSU7 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.26■□□□□ 0.67
TMX2-CTNND1H3BSU7 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.26■□□□□ 0.67
TMX2-CTNND1H3BSU7 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.26■□□□□ 0.67
TMX2-CTNND1H3BSU7 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.26■□□□□ 0.67
TMX2-CTNND1H3BSU7 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TMX2-CTNND1H3BSU7 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMX2-CTNND1H3BSU7 AL355075.4-201ENST00000554988 638 ntBASIC19.26■□□□□ 0.67
TMX2-CTNND1H3BSU7 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.26■□□□□ 0.67
TMX2-CTNND1H3BSU7 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.26■□□□□ 0.67
TMX2-CTNND1H3BSU7 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.26■□□□□ 0.67
TMX2-CTNND1H3BSU7 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
TMX2-CTNND1H3BSU7 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TMX2-CTNND1H3BSU7 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.26■□□□□ 0.67
TMX2-CTNND1H3BSU7 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMX2-CTNND1H3BSU7 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TMX2-CTNND1H3BSU7 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMX2-CTNND1H3BSU7 AC027702.1-201ENST00000563810 1770 ntBASIC19.26■□□□□ 0.67
TMX2-CTNND1H3BSU7 GABARAPL3-202ENST00000624044 1851 ntBASIC19.26■□□□□ 0.67
TMX2-CTNND1H3BSU7 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
TMX2-CTNND1H3BSU7 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMX2-CTNND1H3BSU7 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TMX2-CTNND1H3BSU7 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
TMX2-CTNND1H3BSU7 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMX2-CTNND1H3BSU7 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMX2-CTNND1H3BSU7 AC098818.2-201ENST00000564925 2320 ntBASIC19.25■□□□□ 0.67
TMX2-CTNND1H3BSU7 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.25■□□□□ 0.67
TMX2-CTNND1H3BSU7 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.25■□□□□ 0.67
TMX2-CTNND1H3BSU7 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMX2-CTNND1H3BSU7 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TMX2-CTNND1H3BSU7 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMX2-CTNND1H3BSU7 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMX2-CTNND1H3BSU7 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMX2-CTNND1H3BSU7 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.25■□□□□ 0.67
TMX2-CTNND1H3BSU7 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMX2-CTNND1H3BSU7 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
TMX2-CTNND1H3BSU7 HLA-G-202ENST00000376815 851 ntBASIC19.25■□□□□ 0.67
TMX2-CTNND1H3BSU7 HLA-G-203ENST00000376818 1127 ntBASIC19.25■□□□□ 0.67
TMX2-CTNND1H3BSU7 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.25■□□□□ 0.67
TMX2-CTNND1H3BSU7 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.25■□□□□ 0.67
TMX2-CTNND1H3BSU7 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMX2-CTNND1H3BSU7 KRT18P21-201ENST00000515767 1272 ntBASIC19.25■□□□□ 0.67
TMX2-CTNND1H3BSU7 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
TMX2-CTNND1H3BSU7 AC010331.1-201ENST00000611423 582 ntBASIC19.25■□□□□ 0.67
TMX2-CTNND1H3BSU7 MIR2861-201ENST00000636310 90 ntBASIC19.25■□□□□ 0.67
TMX2-CTNND1H3BSU7 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMX2-CTNND1H3BSU7 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMX2-CTNND1H3BSU7 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.25■□□□□ 0.67
TMX2-CTNND1H3BSU7 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms