Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
TBC1D3FA6NER0 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TBC1D3FA6NER0 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.57■□□□□ 0.72
TBC1D3FA6NER0 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.57■□□□□ 0.72
TBC1D3FA6NER0 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.57■□□□□ 0.72
TBC1D3FA6NER0 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TBC1D3FA6NER0 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.57■□□□□ 0.72
TBC1D3FA6NER0 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.57■□□□□ 0.72
TBC1D3FA6NER0 FITM1-202ENST00000559294 800 ntBASIC19.57■□□□□ 0.72
TBC1D3FA6NER0 NAPSB-206ENST00000562112 1266 ntBASIC19.57■□□□□ 0.72
TBC1D3FA6NER0 AC010331.1-201ENST00000611423 582 ntBASIC19.57■□□□□ 0.72
TBC1D3FA6NER0 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.57■□□□□ 0.72
TBC1D3FA6NER0 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.57■□□□□ 0.72
TBC1D3FA6NER0 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TBC1D3FA6NER0 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TBC1D3FA6NER0 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TBC1D3FA6NER0 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
TBC1D3FA6NER0 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TBC1D3FA6NER0 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TBC1D3FA6NER0 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.56■□□□□ 0.72
TBC1D3FA6NER0 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TBC1D3FA6NER0 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.56■□□□□ 0.72
TBC1D3FA6NER0 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
TBC1D3FA6NER0 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.56■□□□□ 0.72
TBC1D3FA6NER0 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TBC1D3FA6NER0 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TBC1D3FA6NER0 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.56■□□□□ 0.72
TBC1D3FA6NER0 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
TBC1D3FA6NER0 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TBC1D3FA6NER0 RCN1P1-201ENST00000400413 996 ntBASIC19.56■□□□□ 0.72
TBC1D3FA6NER0 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TBC1D3FA6NER0 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.56■□□□□ 0.72
TBC1D3FA6NER0 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.56■□□□□ 0.72
TBC1D3FA6NER0 AC145285.6-201ENST00000604632 637 ntBASIC19.56■□□□□ 0.72
TBC1D3FA6NER0 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.56■□□□□ 0.72
TBC1D3FA6NER0 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.56■□□□□ 0.72
TBC1D3FA6NER0 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TBC1D3FA6NER0 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TBC1D3FA6NER0 LINC01568-207ENST00000641790 1380 ntBASIC19.56■□□□□ 0.72
TBC1D3FA6NER0 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TBC1D3FA6NER0 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TBC1D3FA6NER0 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.55■□□□□ 0.72
TBC1D3FA6NER0 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.55■□□□□ 0.72
TBC1D3FA6NER0 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TBC1D3FA6NER0 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TBC1D3FA6NER0 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
TBC1D3FA6NER0 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TBC1D3FA6NER0 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TBC1D3FA6NER0 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.55■□□□□ 0.72
TBC1D3FA6NER0 AC026271.3-201ENST00000571884 352 ntBASIC19.55■□□□□ 0.72
TBC1D3FA6NER0 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.55■□□□□ 0.72
TBC1D3FA6NER0 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TBC1D3FA6NER0 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.55■□□□□ 0.72
TBC1D3FA6NER0 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.55■□□□□ 0.72
TBC1D3FA6NER0 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
TBC1D3FA6NER0 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TBC1D3FA6NER0 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TBC1D3FA6NER0 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.55■□□□□ 0.72
TBC1D3FA6NER0 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TBC1D3FA6NER0 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
TBC1D3FA6NER0 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
TBC1D3FA6NER0 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TBC1D3FA6NER0 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TBC1D3FA6NER0 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TBC1D3FA6NER0 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TBC1D3FA6NER0 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TBC1D3FA6NER0 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TBC1D3FA6NER0 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TBC1D3FA6NER0 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TBC1D3FA6NER0 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.54■□□□□ 0.72
TBC1D3FA6NER0 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TBC1D3FA6NER0 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.54■□□□□ 0.72
TBC1D3FA6NER0 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.54■□□□□ 0.72
TBC1D3FA6NER0 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TBC1D3FA6NER0 AC005363.2-201ENST00000618631 242 ntBASIC19.54■□□□□ 0.72
TBC1D3FA6NER0 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TBC1D3FA6NER0 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.54■□□□□ 0.72
TBC1D3FA6NER0 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
TBC1D3FA6NER0 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TBC1D3FA6NER0 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TBC1D3FA6NER0 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TBC1D3FA6NER0 TMEM179-206ENST00000616017 1645 ntBASIC19.54■□□□□ 0.72
TBC1D3FA6NER0 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.54■□□□□ 0.72
TBC1D3FA6NER0 CYP2D8P-201ENST00000433633 1490 ntBASIC19.54■□□□□ 0.72
TBC1D3FA6NER0 AC073314.1-201ENST00000568729 2216 ntBASIC19.53■□□□□ 0.72
TBC1D3FA6NER0 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
TBC1D3FA6NER0 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
TBC1D3FA6NER0 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TBC1D3FA6NER0 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TBC1D3FA6NER0 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TBC1D3FA6NER0 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TBC1D3FA6NER0 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TBC1D3FA6NER0 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.53■□□□□ 0.72
TBC1D3FA6NER0 AC004980.1-204ENST00000429707 299 ntBASIC19.53■□□□□ 0.72
TBC1D3FA6NER0 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.53■□□□□ 0.72
TBC1D3FA6NER0 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.53■□□□□ 0.72
TBC1D3FA6NER0 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.53■□□□□ 0.72
TBC1D3FA6NER0 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.53■□□□□ 0.72
TBC1D3FA6NER0 B3GAT3P1-201ENST00000471720 806 ntBASIC19.53■□□□□ 0.72
TBC1D3FA6NER0 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms