Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
MBD3L3A6NE82 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
MBD3L3A6NE82 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MBD3L3A6NE82 AC009237.14-201ENST00000609975 1594 ntBASIC17.29■□□□□ 0.36
MBD3L3A6NE82 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MBD3L3A6NE82 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.29■□□□□ 0.36
MBD3L3A6NE82 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MBD3L3A6NE82 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.29■□□□□ 0.36
MBD3L3A6NE82 AC004951.3-201ENST00000418645 1148 ntBASIC17.29■□□□□ 0.36
MBD3L3A6NE82 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.29■□□□□ 0.36
MBD3L3A6NE82 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.29■□□□□ 0.36
MBD3L3A6NE82 AC097488.1-201ENST00000507834 756 ntBASIC17.29■□□□□ 0.36
MBD3L3A6NE82 AP000692.2-201ENST00000608391 879 ntBASIC17.29■□□□□ 0.36
MBD3L3A6NE82 AC010331.1-201ENST00000611423 582 ntBASIC17.29■□□□□ 0.36
MBD3L3A6NE82 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
MBD3L3A6NE82 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.29■□□□□ 0.36
MBD3L3A6NE82 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.29■□□□□ 0.36
MBD3L3A6NE82 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC17.29■□□□□ 0.36
MBD3L3A6NE82 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.29■□□□□ 0.36
MBD3L3A6NE82 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
MBD3L3A6NE82 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
MBD3L3A6NE82 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.29■□□□□ 0.36
MBD3L3A6NE82 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MBD3L3A6NE82 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MBD3L3A6NE82 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC17.28■□□□□ 0.36
MBD3L3A6NE82 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MBD3L3A6NE82 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MBD3L3A6NE82 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.28■□□□□ 0.36
MBD3L3A6NE82 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MBD3L3A6NE82 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
MBD3L3A6NE82 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
MBD3L3A6NE82 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
MBD3L3A6NE82 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.28■□□□□ 0.36
MBD3L3A6NE82 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.28■□□□□ 0.36
MBD3L3A6NE82 C2orf69P3-201ENST00000565542 1120 ntBASIC17.28■□□□□ 0.36
MBD3L3A6NE82 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.28■□□□□ 0.36
MBD3L3A6NE82 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MBD3L3A6NE82 AC011298.2-201ENST00000617989 482 ntBASIC17.28■□□□□ 0.36
MBD3L3A6NE82 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
MBD3L3A6NE82 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
MBD3L3A6NE82 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MBD3L3A6NE82 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MBD3L3A6NE82 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MBD3L3A6NE82 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.28■□□□□ 0.36
MBD3L3A6NE82 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.27■□□□□ 0.36
MBD3L3A6NE82 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
MBD3L3A6NE82 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
MBD3L3A6NE82 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
MBD3L3A6NE82 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MBD3L3A6NE82 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
MBD3L3A6NE82 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
MBD3L3A6NE82 AL691432.2-201ENST00000607222 2038 ntBASIC17.27■□□□□ 0.36
MBD3L3A6NE82 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
MBD3L3A6NE82 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MBD3L3A6NE82 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.27■□□□□ 0.36
MBD3L3A6NE82 AC113347.1-201ENST00000413321 391 ntBASIC17.27■□□□□ 0.36
MBD3L3A6NE82 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.27■□□□□ 0.36
MBD3L3A6NE82 TMPOP1-202ENST00000424642 1267 ntBASIC17.27■□□□□ 0.36
MBD3L3A6NE82 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.27■□□□□ 0.36
MBD3L3A6NE82 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.27■□□□□ 0.36
MBD3L3A6NE82 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
MBD3L3A6NE82 AC092865.7-201ENST00000641832 219 ntBASIC17.27■□□□□ 0.36
MBD3L3A6NE82 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.27■□□□□ 0.36
MBD3L3A6NE82 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.27■□□□□ 0.36
MBD3L3A6NE82 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.27■□□□□ 0.35
MBD3L3A6NE82 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
MBD3L3A6NE82 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
MBD3L3A6NE82 PKD1P6-201ENST00000343738 4769 ntBASIC17.27■□□□□ 0.35
MBD3L3A6NE82 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MBD3L3A6NE82 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
MBD3L3A6NE82 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.26■□□□□ 0.35
MBD3L3A6NE82 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MBD3L3A6NE82 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MBD3L3A6NE82 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MBD3L3A6NE82 CRYGFP-201ENST00000418459 633 ntBASIC17.26■□□□□ 0.35
MBD3L3A6NE82 Z85996.1-201ENST00000494644 937 ntBASIC17.26■□□□□ 0.35
MBD3L3A6NE82 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.26■□□□□ 0.35
MBD3L3A6NE82 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.26■□□□□ 0.35
MBD3L3A6NE82 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.26■□□□□ 0.35
MBD3L3A6NE82 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MBD3L3A6NE82 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
MBD3L3A6NE82 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
MBD3L3A6NE82 RN7SL850P-201ENST00000579959 291 ntBASIC17.26■□□□□ 0.35
MBD3L3A6NE82 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
MBD3L3A6NE82 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MBD3L3A6NE82 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MBD3L3A6NE82 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
MBD3L3A6NE82 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
MBD3L3A6NE82 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MBD3L3A6NE82 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MBD3L3A6NE82 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
MBD3L3A6NE82 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
MBD3L3A6NE82 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MBD3L3A6NE82 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MBD3L3A6NE82 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.25■□□□□ 0.35
MBD3L3A6NE82 TSPY14P-201ENST00000303979 915 ntBASIC17.25■□□□□ 0.35
MBD3L3A6NE82 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.25■□□□□ 0.35
MBD3L3A6NE82 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MBD3L3A6NE82 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MBD3L3A6NE82 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms