Protein–RNA interactions for Protein: A0A0B4J237

TRAV8-2, T-cell receptor alpha variable 8-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-2A0A0B4J237 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV8-2A0A0B4J237 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV8-2A0A0B4J237 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC14.91□□□□□ -0.02
TRAV8-2A0A0B4J237 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV8-2A0A0B4J237 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV8-2A0A0B4J237 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV8-2A0A0B4J237 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV8-2A0A0B4J237 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV8-2A0A0B4J237 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAV8-2A0A0B4J237 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV8-2A0A0B4J237 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV8-2A0A0B4J237 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
TRAV8-2A0A0B4J237 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAV8-2A0A0B4J237 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV8-2A0A0B4J237 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC14.9□□□□□ -0.02
TRAV8-2A0A0B4J237 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV8-2A0A0B4J237 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAV8-2A0A0B4J237 CDCA4P2-201ENST00000441182 718 ntBASIC14.9□□□□□ -0.02
TRAV8-2A0A0B4J237 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC14.9□□□□□ -0.02
TRAV8-2A0A0B4J237 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC14.9□□□□□ -0.02
TRAV8-2A0A0B4J237 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV8-2A0A0B4J237 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC14.9□□□□□ -0.02
TRAV8-2A0A0B4J237 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV8-2A0A0B4J237 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV8-2A0A0B4J237 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV8-2A0A0B4J237 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV8-2A0A0B4J237 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV8-2A0A0B4J237 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV8-2A0A0B4J237 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV8-2A0A0B4J237 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV8-2A0A0B4J237 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV8-2A0A0B4J237 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
TRAV8-2A0A0B4J237 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV8-2A0A0B4J237 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAV8-2A0A0B4J237 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC14.9□□□□□ -0.02
TRAV8-2A0A0B4J237 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
TRAV8-2A0A0B4J237 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC14.89□□□□□ -0.03
TRAV8-2A0A0B4J237 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV8-2A0A0B4J237 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV8-2A0A0B4J237 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
TRAV8-2A0A0B4J237 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV8-2A0A0B4J237 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV8-2A0A0B4J237 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV8-2A0A0B4J237 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
TRAV8-2A0A0B4J237 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV8-2A0A0B4J237 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAV8-2A0A0B4J237 MOK-233ENST00000524214 1539 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAV8-2A0A0B4J237 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
TRAV8-2A0A0B4J237 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAV8-2A0A0B4J237 GPX1P1-201ENST00000388829 606 ntBASIC14.89□□□□□ -0.03
TRAV8-2A0A0B4J237 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
TRAV8-2A0A0B4J237 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAV8-2A0A0B4J237 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV8-2A0A0B4J237 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
TRAV8-2A0A0B4J237 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV8-2A0A0B4J237 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV8-2A0A0B4J237 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV8-2A0A0B4J237 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
TRAV8-2A0A0B4J237 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV8-2A0A0B4J237 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
TRAV8-2A0A0B4J237 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAV8-2A0A0B4J237 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV8-2A0A0B4J237 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
TRAV8-2A0A0B4J237 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
TRAV8-2A0A0B4J237 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV8-2A0A0B4J237 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV8-2A0A0B4J237 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV8-2A0A0B4J237 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAV8-2A0A0B4J237 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV8-2A0A0B4J237 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV8-2A0A0B4J237 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC14.88□□□□□ -0.03
TRAV8-2A0A0B4J237 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV8-2A0A0B4J237 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV8-2A0A0B4J237 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAV8-2A0A0B4J237 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV8-2A0A0B4J237 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
TRAV8-2A0A0B4J237 AC018445.3-201ENST00000624177 1945 ntBASIC14.88□□□□□ -0.03
TRAV8-2A0A0B4J237 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV8-2A0A0B4J237 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV8-2A0A0B4J237 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAV8-2A0A0B4J237 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV8-2A0A0B4J237 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
TRAV8-2A0A0B4J237 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV8-2A0A0B4J237 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TRAV8-2A0A0B4J237 TP73-202ENST00000354437 2140 ntTSL 5 BASIC14.88□□□□□ -0.03
TRAV8-2A0A0B4J237 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV8-2A0A0B4J237 SERP1-205ENST00000487153 657 ntTSL 4 BASIC14.88□□□□□ -0.03
TRAV8-2A0A0B4J237 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC14.88□□□□□ -0.03
TRAV8-2A0A0B4J237 PHB2-213ENST00000546111 858 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAV8-2A0A0B4J237 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC14.88□□□□□ -0.03
TRAV8-2A0A0B4J237 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV8-2A0A0B4J237 MARS-234ENST00000630571 216 ntTSL 5 BASIC14.88□□□□□ -0.03
TRAV8-2A0A0B4J237 MARS-235ENST00000630803 183 ntTSL 3 BASIC14.88□□□□□ -0.03
TRAV8-2A0A0B4J237 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV8-2A0A0B4J237 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV8-2A0A0B4J237 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
TRAV8-2A0A0B4J237 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV8-2A0A0B4J237 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV8-2A0A0B4J237 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV8-2A0A0B4J237 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms