Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SCN11AQ9UI33 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.84□□□□□ -1.31
SCN11AQ9UI33 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SCN11AQ9UI33 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.84□□□□□ -1.31
SCN11AQ9UI33 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SCN11AQ9UI33 AC144833.1-201ENST00000567953 4089 ntBASIC6.84□□□□□ -1.31
SCN11AQ9UI33 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SCN11AQ9UI33 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SCN11AQ9UI33 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SCN11AQ9UI33 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC6.84□□□□□ -1.31
SCN11AQ9UI33 AL590399.2-201ENST00000427536 309 ntBASIC6.84□□□□□ -1.31
SCN11AQ9UI33 AC093414.1-201ENST00000434712 514 ntBASIC6.84□□□□□ -1.31
SCN11AQ9UI33 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC6.84□□□□□ -1.31
SCN11AQ9UI33 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC6.84□□□□□ -1.31
SCN11AQ9UI33 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.84□□□□□ -1.31
SCN11AQ9UI33 AC130364.2-201ENST00000528639 604 ntBASIC6.84□□□□□ -1.31
SCN11AQ9UI33 AC021006.3-201ENST00000530771 192 ntBASIC6.84□□□□□ -1.31
SCN11AQ9UI33 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.84□□□□□ -1.31
SCN11AQ9UI33 AC137768.1-201ENST00000549998 553 ntBASIC6.84□□□□□ -1.31
SCN11AQ9UI33 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.84□□□□□ -1.31
SCN11AQ9UI33 AC009117.1-201ENST00000563948 554 ntBASIC6.84□□□□□ -1.31
SCN11AQ9UI33 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.84□□□□□ -1.31
SCN11AQ9UI33 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC6.84□□□□□ -1.31
SCN11AQ9UI33 LINC02035-201ENST00000610128 5476 ntBASIC6.84□□□□□ -1.31
SCN11AQ9UI33 AC073575.2-201ENST00000614212 627 ntBASIC6.84□□□□□ -1.31
SCN11AQ9UI33 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SCN11AQ9UI33 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.32
SCN11AQ9UI33 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.84□□□□□ -1.32
SCN11AQ9UI33 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.84□□□□□ -1.32
SCN11AQ9UI33 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.84□□□□□ -1.32
SCN11AQ9UI33 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC6.84□□□□□ -1.32
SCN11AQ9UI33 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
SCN11AQ9UI33 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
SCN11AQ9UI33 AC007996.1-201ENST00000620414 2821 ntBASIC6.83□□□□□ -1.32
SCN11AQ9UI33 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.83□□□□□ -1.32
SCN11AQ9UI33 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.83□□□□□ -1.32
SCN11AQ9UI33 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SCN11AQ9UI33 RNA5SP90-201ENST00000364801 99 ntBASIC6.83□□□□□ -1.32
SCN11AQ9UI33 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
SCN11AQ9UI33 RNU1-74P-201ENST00000384108 171 ntBASIC6.83□□□□□ -1.32
SCN11AQ9UI33 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
SCN11AQ9UI33 AC016397.1-201ENST00000412463 242 ntBASIC6.83□□□□□ -1.32
SCN11AQ9UI33 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC6.83□□□□□ -1.32
SCN11AQ9UI33 SEPT10P1-201ENST00000517342 1162 ntBASIC6.83□□□□□ -1.32
SCN11AQ9UI33 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC6.83□□□□□ -1.32
SCN11AQ9UI33 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC6.83□□□□□ -1.32
SCN11AQ9UI33 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC6.83□□□□□ -1.32
SCN11AQ9UI33 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC6.83□□□□□ -1.32
SCN11AQ9UI33 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC6.83□□□□□ -1.32
SCN11AQ9UI33 AC008814.1-201ENST00000603797 406 ntBASIC6.83□□□□□ -1.32
SCN11AQ9UI33 AC005377.1-201ENST00000605126 456 ntBASIC6.83□□□□□ -1.32
SCN11AQ9UI33 NAA60-237ENST00000615865 326 ntTSL 5 BASIC6.83□□□□□ -1.32
SCN11AQ9UI33 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC6.83□□□□□ -1.32
SCN11AQ9UI33 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.83□□□□□ -1.32
SCN11AQ9UI33 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
SCN11AQ9UI33 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
SCN11AQ9UI33 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
SCN11AQ9UI33 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
SCN11AQ9UI33 MAPK10-371ENST00000641952 5209 ntBASIC6.83□□□□□ -1.32
SCN11AQ9UI33 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
SCN11AQ9UI33 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.83□□□□□ -1.32
SCN11AQ9UI33 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC6.83□□□□□ -1.32
SCN11AQ9UI33 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
SCN11AQ9UI33 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
SCN11AQ9UI33 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.83□□□□□ -1.32
SCN11AQ9UI33 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.82□□□□□ -1.32
SCN11AQ9UI33 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SCN11AQ9UI33 AC073465.2-201ENST00000440938 498 ntBASIC6.82□□□□□ -1.32
SCN11AQ9UI33 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC6.82□□□□□ -1.32
SCN11AQ9UI33 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.82□□□□□ -1.32
SCN11AQ9UI33 AC002075.1-201ENST00000457396 676 ntBASIC6.82□□□□□ -1.32
SCN11AQ9UI33 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC6.82□□□□□ -1.32
SCN11AQ9UI33 AC006427.1-201ENST00000514359 712 ntBASIC6.82□□□□□ -1.32
SCN11AQ9UI33 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC6.82□□□□□ -1.32
SCN11AQ9UI33 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC6.82□□□□□ -1.32
SCN11AQ9UI33 AC104785.1-201ENST00000603220 588 ntBASIC6.82□□□□□ -1.32
SCN11AQ9UI33 AL356752.1-201ENST00000615844 593 ntBASIC6.82□□□□□ -1.32
SCN11AQ9UI33 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC6.82□□□□□ -1.32
SCN11AQ9UI33 THAP12P4-201ENST00000528321 2266 ntBASIC6.82□□□□□ -1.32
SCN11AQ9UI33 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
SCN11AQ9UI33 AC003973.3-201ENST00000624863 2822 ntBASIC6.82□□□□□ -1.32
SCN11AQ9UI33 PRNCR1-201ENST00000635449 12727 ntBASIC6.82□□□□□ -1.32
SCN11AQ9UI33 LCOR-201ENST00000286067 4542 ntBASIC6.82□□□□□ -1.32
SCN11AQ9UI33 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SCN11AQ9UI33 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SCN11AQ9UI33 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SCN11AQ9UI33 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SCN11AQ9UI33 AC131971.1-201ENST00000332881 1482 ntBASIC6.82□□□□□ -1.32
SCN11AQ9UI33 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
SCN11AQ9UI33 U3.10-201ENST00000364459 214 ntBASIC6.82□□□□□ -1.32
SCN11AQ9UI33 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC6.82□□□□□ -1.32
SCN11AQ9UI33 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC6.82□□□□□ -1.32
SCN11AQ9UI33 RPL12P17-201ENST00000432393 498 ntBASIC6.82□□□□□ -1.32
SCN11AQ9UI33 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC6.82□□□□□ -1.32
SCN11AQ9UI33 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC6.82□□□□□ -1.32
SCN11AQ9UI33 TAAR4P-201ENST00000454843 1039 ntBASIC6.82□□□□□ -1.32
SCN11AQ9UI33 AC009127.1-201ENST00000467090 155 ntBASIC6.82□□□□□ -1.32
SCN11AQ9UI33 RPL7P16-201ENST00000479738 738 ntBASIC6.82□□□□□ -1.32
SCN11AQ9UI33 PCNPP1-201ENST00000552501 511 ntBASIC6.82□□□□□ -1.32
SCN11AQ9UI33 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms