Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 RN7SKP34-201ENST00000516142 244 ntBASIC6.65□□□□□ -1.34
PPARGC1AQ9UBK2 RNA5SP303-201ENST00000516192 130 ntBASIC6.65□□□□□ -1.34
PPARGC1AQ9UBK2 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC6.65□□□□□ -1.34
PPARGC1AQ9UBK2 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC6.65□□□□□ -1.34
PPARGC1AQ9UBK2 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC6.65□□□□□ -1.34
PPARGC1AQ9UBK2 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC6.65□□□□□ -1.34
PPARGC1AQ9UBK2 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC6.65□□□□□ -1.34
PPARGC1AQ9UBK2 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.65□□□□□ -1.34
PPARGC1AQ9UBK2 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.65□□□□□ -1.34
PPARGC1AQ9UBK2 DCN-209ENST00000546745 1026 ntTSL 3 BASIC6.65□□□□□ -1.34
PPARGC1AQ9UBK2 AC011611.5-201ENST00000552477 578 ntBASIC6.65□□□□□ -1.34
PPARGC1AQ9UBK2 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC6.65□□□□□ -1.34
PPARGC1AQ9UBK2 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC6.65□□□□□ -1.34
PPARGC1AQ9UBK2 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC6.65□□□□□ -1.34
PPARGC1AQ9UBK2 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC6.65□□□□□ -1.34
PPARGC1AQ9UBK2 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC6.65□□□□□ -1.34
PPARGC1AQ9UBK2 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC6.65□□□□□ -1.34
PPARGC1AQ9UBK2 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC6.65□□□□□ -1.34
PPARGC1AQ9UBK2 RBM22P1-201ENST00000578589 1214 ntBASIC6.65□□□□□ -1.34
PPARGC1AQ9UBK2 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.65□□□□□ -1.34
PPARGC1AQ9UBK2 DPRXP5-201ENST00000604662 539 ntBASIC6.65□□□□□ -1.34
PPARGC1AQ9UBK2 AL133507.1-201ENST00000605269 557 ntBASIC6.65□□□□□ -1.34
PPARGC1AQ9UBK2 TUSC7.1-201ENST00000610969 165 ntBASIC6.65□□□□□ -1.34
PPARGC1AQ9UBK2 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.65□□□□□ -1.34
PPARGC1AQ9UBK2 AC131159.1-201ENST00000621854 213 ntBASIC6.65□□□□□ -1.34
PPARGC1AQ9UBK2 AC089999.3-201ENST00000622440 577 ntBASIC6.65□□□□□ -1.34
PPARGC1AQ9UBK2 AC012254.5-201ENST00000623573 478 ntBASIC6.65□□□□□ -1.34
PPARGC1AQ9UBK2 AC018659.2-201ENST00000624690 715 ntBASIC6.65□□□□□ -1.34
PPARGC1AQ9UBK2 AP000550.3-201ENST00000637734 379 ntBASIC6.65□□□□□ -1.34
PPARGC1AQ9UBK2 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
PPARGC1AQ9UBK2 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
PPARGC1AQ9UBK2 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
PPARGC1AQ9UBK2 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
PPARGC1AQ9UBK2 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
PPARGC1AQ9UBK2 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.65□□□□□ -1.35
PPARGC1AQ9UBK2 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
PPARGC1AQ9UBK2 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.65□□□□□ -1.35
PPARGC1AQ9UBK2 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.65□□□□□ -1.35
PPARGC1AQ9UBK2 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.65□□□□□ -1.35
PPARGC1AQ9UBK2 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.65□□□□□ -1.35
PPARGC1AQ9UBK2 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
PPARGC1AQ9UBK2 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
PPARGC1AQ9UBK2 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC6.65□□□□□ -1.35
PPARGC1AQ9UBK2 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC6.65□□□□□ -1.35
PPARGC1AQ9UBK2 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
PPARGC1AQ9UBK2 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.65□□□□□ -1.35
PPARGC1AQ9UBK2 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
PPARGC1AQ9UBK2 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.65□□□□□ -1.35
PPARGC1AQ9UBK2 NCOA4P2-201ENST00000340589 1813 ntBASIC6.64□□□□□ -1.35
PPARGC1AQ9UBK2 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PPARGC1AQ9UBK2 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PPARGC1AQ9UBK2 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PPARGC1AQ9UBK2 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
PPARGC1AQ9UBK2 METTL5-202ENST00000308099 629 ntTSL 3 BASIC6.64□□□□□ -1.35
PPARGC1AQ9UBK2 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
PPARGC1AQ9UBK2 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.64□□□□□ -1.35
PPARGC1AQ9UBK2 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC6.64□□□□□ -1.35
PPARGC1AQ9UBK2 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
PPARGC1AQ9UBK2 RNU6-1242P-201ENST00000391052 103 ntBASIC6.64□□□□□ -1.35
PPARGC1AQ9UBK2 AP003170.5-201ENST00000397185 335 ntBASIC6.64□□□□□ -1.35
PPARGC1AQ9UBK2 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.64□□□□□ -1.35
PPARGC1AQ9UBK2 ALDH7A1P4-201ENST00000412255 178 ntBASIC6.64□□□□□ -1.35
PPARGC1AQ9UBK2 RPL21P50-201ENST00000417698 477 ntBASIC6.64□□□□□ -1.35
PPARGC1AQ9UBK2 SEPT2P1-201ENST00000419651 180 ntBASIC6.64□□□□□ -1.35
PPARGC1AQ9UBK2 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.64□□□□□ -1.35
PPARGC1AQ9UBK2 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC6.64□□□□□ -1.35
PPARGC1AQ9UBK2 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.64□□□□□ -1.35
PPARGC1AQ9UBK2 DSTNP5-201ENST00000427921 523 ntBASIC6.64□□□□□ -1.35
PPARGC1AQ9UBK2 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC6.64□□□□□ -1.35
PPARGC1AQ9UBK2 MRPS21P3-201ENST00000436696 262 ntBASIC6.64□□□□□ -1.35
PPARGC1AQ9UBK2 AL138787.1-202ENST00000437804 898 ntBASIC6.64□□□□□ -1.35
PPARGC1AQ9UBK2 ARMC4P1-201ENST00000438905 707 ntBASIC6.64□□□□□ -1.35
PPARGC1AQ9UBK2 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC6.64□□□□□ -1.35
PPARGC1AQ9UBK2 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC6.64□□□□□ -1.35
PPARGC1AQ9UBK2 EXTL2P1-201ENST00000446218 416 ntBASIC6.64□□□□□ -1.35
PPARGC1AQ9UBK2 AC069540.1-201ENST00000446320 988 ntBASIC6.64□□□□□ -1.35
PPARGC1AQ9UBK2 MTCO2P7-201ENST00000446518 666 ntBASIC6.64□□□□□ -1.35
PPARGC1AQ9UBK2 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
PPARGC1AQ9UBK2 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC6.64□□□□□ -1.35
PPARGC1AQ9UBK2 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC6.64□□□□□ -1.35
PPARGC1AQ9UBK2 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC6.64□□□□□ -1.35
PPARGC1AQ9UBK2 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC6.64□□□□□ -1.35
PPARGC1AQ9UBK2 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.64□□□□□ -1.35
PPARGC1AQ9UBK2 MRPS33P3-201ENST00000513456 322 ntBASIC6.64□□□□□ -1.35
PPARGC1AQ9UBK2 AC087373.1-201ENST00000524920 491 ntBASIC6.64□□□□□ -1.35
PPARGC1AQ9UBK2 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC6.64□□□□□ -1.35
PPARGC1AQ9UBK2 AC135983.3-201ENST00000528049 1226 ntBASIC6.64□□□□□ -1.35
PPARGC1AQ9UBK2 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC6.64□□□□□ -1.35
PPARGC1AQ9UBK2 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC6.64□□□□□ -1.35
PPARGC1AQ9UBK2 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC6.64□□□□□ -1.35
PPARGC1AQ9UBK2 AL121839.1-201ENST00000556233 1185 ntBASIC6.64□□□□□ -1.35
PPARGC1AQ9UBK2 AC090695.1-201ENST00000561269 1222 ntBASIC6.64□□□□□ -1.35
PPARGC1AQ9UBK2 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PPARGC1AQ9UBK2 AC090616.1-201ENST00000583895 447 ntBASIC6.64□□□□□ -1.35
PPARGC1AQ9UBK2 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.64□□□□□ -1.35
PPARGC1AQ9UBK2 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.64□□□□□ -1.35
PPARGC1AQ9UBK2 AL603755.1-201ENST00000619504 163 ntBASIC6.64□□□□□ -1.35
PPARGC1AQ9UBK2 AC004836.1-201ENST00000623032 634 ntBASIC6.64□□□□□ -1.35
PPARGC1AQ9UBK2 AC009120.7-201ENST00000623452 780 ntBASIC6.64□□□□□ -1.35
PPARGC1AQ9UBK2 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms