Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC6.51□□□□□ -1.37
COL20A1Q9P218 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.51□□□□□ -1.37
COL20A1Q9P218 AC078899.1-201ENST00000521432 1185 ntBASIC6.51□□□□□ -1.37
COL20A1Q9P218 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC6.51□□□□□ -1.37
COL20A1Q9P218 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.51□□□□□ -1.37
COL20A1Q9P218 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
COL20A1Q9P218 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
COL20A1Q9P218 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.51□□□□□ -1.37
COL20A1Q9P218 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC6.51□□□□□ -1.37
COL20A1Q9P218 AC006116.7-201ENST00000590141 756 ntBASIC6.51□□□□□ -1.37
COL20A1Q9P218 AC005776.1-201ENST00000603164 290 ntBASIC6.51□□□□□ -1.37
COL20A1Q9P218 MTATP6P2-201ENST00000603319 678 ntBASIC6.51□□□□□ -1.37
COL20A1Q9P218 AC017076.1-201ENST00000607613 578 ntBASIC6.51□□□□□ -1.37
COL20A1Q9P218 AL096803.3-201ENST00000609032 532 ntBASIC6.51□□□□□ -1.37
COL20A1Q9P218 AL359513.1-201ENST00000614364 557 ntBASIC6.51□□□□□ -1.37
COL20A1Q9P218 AC007204.2-201ENST00000615022 616 ntBASIC6.51□□□□□ -1.37
COL20A1Q9P218 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
COL20A1Q9P218 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL20A1Q9P218 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL20A1Q9P218 NAMPTP1-201ENST00000440465 2514 ntBASIC6.51□□□□□ -1.37
COL20A1Q9P218 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.51□□□□□ -1.37
COL20A1Q9P218 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.51□□□□□ -1.37
COL20A1Q9P218 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL20A1Q9P218 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
COL20A1Q9P218 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL20A1Q9P218 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
COL20A1Q9P218 AC117409.1-201ENST00000470499 1310 ntBASIC6.5□□□□□ -1.37
COL20A1Q9P218 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
COL20A1Q9P218 ICE2P1-201ENST00000512800 1849 ntBASIC6.5□□□□□ -1.37
COL20A1Q9P218 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COL20A1Q9P218 ABCA11P-202ENST00000504019 2110 ntBASIC6.5□□□□□ -1.37
COL20A1Q9P218 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.5□□□□□ -1.37
COL20A1Q9P218 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COL20A1Q9P218 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.5□□□□□ -1.37
COL20A1Q9P218 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL20A1Q9P218 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COL20A1Q9P218 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.5□□□□□ -1.37
COL20A1Q9P218 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COL20A1Q9P218 RN7SKP162-201ENST00000363605 345 ntBASIC6.5□□□□□ -1.37
COL20A1Q9P218 RNA5SP234-201ENST00000363916 119 ntBASIC6.5□□□□□ -1.37
COL20A1Q9P218 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.5□□□□□ -1.37
COL20A1Q9P218 BMS1P13-201ENST00000417301 885 ntBASIC6.5□□□□□ -1.37
COL20A1Q9P218 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.5□□□□□ -1.37
COL20A1Q9P218 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC6.5□□□□□ -1.37
COL20A1Q9P218 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.5□□□□□ -1.37
COL20A1Q9P218 OR7E116P-201ENST00000448529 957 ntBASIC6.5□□□□□ -1.37
COL20A1Q9P218 AL450023.1-201ENST00000450868 751 ntBASIC6.5□□□□□ -1.37
COL20A1Q9P218 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC6.5□□□□□ -1.37
COL20A1Q9P218 OSTCP1-201ENST00000455507 450 ntBASIC6.5□□□□□ -1.37
COL20A1Q9P218 AC074386.1-201ENST00000476560 767 ntBASIC6.5□□□□□ -1.37
COL20A1Q9P218 AC087672.1-201ENST00000479876 766 ntBASIC6.5□□□□□ -1.37
COL20A1Q9P218 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC6.5□□□□□ -1.37
COL20A1Q9P218 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COL20A1Q9P218 RPS4XP14-201ENST00000493072 781 ntBASIC6.5□□□□□ -1.37
COL20A1Q9P218 DUTP1-201ENST00000493631 470 ntBASIC6.5□□□□□ -1.37
COL20A1Q9P218 FTH1P8-201ENST00000498161 514 ntBASIC6.5□□□□□ -1.37
COL20A1Q9P218 AC119751.4-201ENST00000507498 357 ntBASIC6.5□□□□□ -1.37
COL20A1Q9P218 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.5□□□□□ -1.37
COL20A1Q9P218 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.5□□□□□ -1.37
COL20A1Q9P218 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COL20A1Q9P218 AC008147.3-201ENST00000548666 354 ntBASIC6.5□□□□□ -1.37
COL20A1Q9P218 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.5□□□□□ -1.37
COL20A1Q9P218 AC126615.2-201ENST00000553003 515 ntBASIC6.5□□□□□ -1.37
COL20A1Q9P218 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC6.5□□□□□ -1.37
COL20A1Q9P218 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC6.5□□□□□ -1.37
COL20A1Q9P218 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC6.5□□□□□ -1.37
COL20A1Q9P218 AC007225.2-201ENST00000562529 256 ntBASIC6.5□□□□□ -1.37
COL20A1Q9P218 AC027216.1-201ENST00000577726 685 ntBASIC6.5□□□□□ -1.37
COL20A1Q9P218 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC6.5□□□□□ -1.37
COL20A1Q9P218 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC6.5□□□□□ -1.37
COL20A1Q9P218 AC015911.5-201ENST00000587076 451 ntBASIC6.5□□□□□ -1.37
COL20A1Q9P218 AC079395.2-201ENST00000610982 737 ntBASIC6.5□□□□□ -1.37
COL20A1Q9P218 AL049777.1-201ENST00000622740 518 ntBASIC6.5□□□□□ -1.37
COL20A1Q9P218 AP000943.4-201ENST00000622912 357 ntBASIC6.5□□□□□ -1.37
COL20A1Q9P218 AL390318.1-201ENST00000624564 687 ntBASIC6.5□□□□□ -1.37
COL20A1Q9P218 AC007683.2-201ENST00000624681 714 ntBASIC6.5□□□□□ -1.37
COL20A1Q9P218 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.5□□□□□ -1.37
COL20A1Q9P218 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL20A1Q9P218 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL20A1Q9P218 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COL20A1Q9P218 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.5□□□□□ -1.37
COL20A1Q9P218 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL20A1Q9P218 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
COL20A1Q9P218 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.5□□□□□ -1.37
COL20A1Q9P218 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL20A1Q9P218 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.5□□□□□ -1.37
COL20A1Q9P218 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COL20A1Q9P218 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COL20A1Q9P218 AL078595.2-201ENST00000605309 1780 ntBASIC6.49□□□□□ -1.37
COL20A1Q9P218 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL20A1Q9P218 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL20A1Q9P218 AC025470.1-201ENST00000510053 2032 ntBASIC6.49□□□□□ -1.37
COL20A1Q9P218 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
COL20A1Q9P218 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.49□□□□□ -1.37
COL20A1Q9P218 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.49□□□□□ -1.37
COL20A1Q9P218 RNU6-925P-201ENST00000384629 104 ntBASIC6.49□□□□□ -1.37
COL20A1Q9P218 MIR1178-201ENST00000408396 91 ntBASIC6.49□□□□□ -1.37
COL20A1Q9P218 RNA5SP251-201ENST00000410614 137 ntBASIC6.49□□□□□ -1.37
COL20A1Q9P218 XIST-201ENST00000416330 750 ntTSL 2 BASIC6.49□□□□□ -1.37
COL20A1Q9P218 AL133173.1-201ENST00000423458 397 ntBASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms