Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LRRC40Q9H9A6 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
LRRC40Q9H9A6 AC009784.1-201ENST00000426484 460 ntBASIC5.63□□□□□ -1.51
LRRC40Q9H9A6 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.63□□□□□ -1.51
LRRC40Q9H9A6 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.63□□□□□ -1.51
LRRC40Q9H9A6 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.63□□□□□ -1.51
LRRC40Q9H9A6 LRRC37A14P-201ENST00000452297 462 ntBASIC5.63□□□□□ -1.51
LRRC40Q9H9A6 RN7SL583P-201ENST00000475692 287 ntBASIC5.63□□□□□ -1.51
LRRC40Q9H9A6 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.63□□□□□ -1.51
LRRC40Q9H9A6 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.63□□□□□ -1.51
LRRC40Q9H9A6 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.63□□□□□ -1.51
LRRC40Q9H9A6 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.63□□□□□ -1.51
LRRC40Q9H9A6 AC079064.1-201ENST00000528365 362 ntBASIC5.63□□□□□ -1.51
LRRC40Q9H9A6 TRIM51DP-201ENST00000529746 596 ntBASIC5.63□□□□□ -1.51
LRRC40Q9H9A6 NANOGNBP2-201ENST00000544753 553 ntBASIC5.63□□□□□ -1.51
LRRC40Q9H9A6 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.63□□□□□ -1.51
LRRC40Q9H9A6 AC234775.3-201ENST00000564612 656 ntBASIC5.63□□□□□ -1.51
LRRC40Q9H9A6 MIR7853-201ENST00000584820 132 ntBASIC5.63□□□□□ -1.51
LRRC40Q9H9A6 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.63□□□□□ -1.51
LRRC40Q9H9A6 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.63□□□□□ -1.51
LRRC40Q9H9A6 AL162574.1-201ENST00000615702 950 ntBASIC5.63□□□□□ -1.51
LRRC40Q9H9A6 AP005431.1-201ENST00000618479 319 ntBASIC5.63□□□□□ -1.51
LRRC40Q9H9A6 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.63□□□□□ -1.51
LRRC40Q9H9A6 AC009950.2-201ENST00000636548 183 ntBASIC5.63□□□□□ -1.51
LRRC40Q9H9A6 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
LRRC40Q9H9A6 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.63□□□□□ -1.51
LRRC40Q9H9A6 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LRRC40Q9H9A6 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.63□□□□□ -1.51
LRRC40Q9H9A6 SRRM1P3-201ENST00000426911 2678 ntBASIC5.63□□□□□ -1.51
LRRC40Q9H9A6 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
LRRC40Q9H9A6 AL359715.3-201ENST00000569267 2123 ntBASIC5.63□□□□□ -1.51
LRRC40Q9H9A6 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.63□□□□□ -1.51
LRRC40Q9H9A6 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.63□□□□□ -1.51
LRRC40Q9H9A6 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.63□□□□□ -1.51
LRRC40Q9H9A6 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LRRC40Q9H9A6 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
LRRC40Q9H9A6 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LRRC40Q9H9A6 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
LRRC40Q9H9A6 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
LRRC40Q9H9A6 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
LRRC40Q9H9A6 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.62□□□□□ -1.51
LRRC40Q9H9A6 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
LRRC40Q9H9A6 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
LRRC40Q9H9A6 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
LRRC40Q9H9A6 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LRRC40Q9H9A6 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.62□□□□□ -1.51
LRRC40Q9H9A6 AC007342.5-201ENST00000571340 2142 ntBASIC5.62□□□□□ -1.51
LRRC40Q9H9A6 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
LRRC40Q9H9A6 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.62□□□□□ -1.51
LRRC40Q9H9A6 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
LRRC40Q9H9A6 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
LRRC40Q9H9A6 SNORD56.6-201ENST00000384569 71 ntBASIC5.62□□□□□ -1.51
LRRC40Q9H9A6 PEX12P1-201ENST00000400284 1048 ntBASIC5.62□□□□□ -1.51
LRRC40Q9H9A6 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.62□□□□□ -1.51
LRRC40Q9H9A6 GAPDHP42-201ENST00000406848 981 ntBASIC5.62□□□□□ -1.51
LRRC40Q9H9A6 RNU2-22P-201ENST00000411266 212 ntBASIC5.62□□□□□ -1.51
LRRC40Q9H9A6 RPSAP35-201ENST00000413753 818 ntBASIC5.62□□□□□ -1.51
LRRC40Q9H9A6 SLC20A1P1-201ENST00000413906 956 ntBASIC5.62□□□□□ -1.51
LRRC40Q9H9A6 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.62□□□□□ -1.51
LRRC40Q9H9A6 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.62□□□□□ -1.51
LRRC40Q9H9A6 ARAFP2-201ENST00000440565 559 ntBASIC5.62□□□□□ -1.51
LRRC40Q9H9A6 SNRPFP2-201ENST00000440710 251 ntBASIC5.62□□□□□ -1.51
LRRC40Q9H9A6 HMGN1P2-201ENST00000445197 310 ntBASIC5.62□□□□□ -1.51
LRRC40Q9H9A6 AL450996.1-201ENST00000445574 1202 ntBASIC5.62□□□□□ -1.51
LRRC40Q9H9A6 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
LRRC40Q9H9A6 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.62□□□□□ -1.51
LRRC40Q9H9A6 AC016687.1-201ENST00000482574 353 ntBASIC5.62□□□□□ -1.51
LRRC40Q9H9A6 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.62□□□□□ -1.51
LRRC40Q9H9A6 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
LRRC40Q9H9A6 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC5.62□□□□□ -1.51
LRRC40Q9H9A6 AC021106.1-201ENST00000509020 1058 ntBASIC5.62□□□□□ -1.51
LRRC40Q9H9A6 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.62□□□□□ -1.51
LRRC40Q9H9A6 SEPT10P1-201ENST00000517342 1162 ntBASIC5.62□□□□□ -1.51
LRRC40Q9H9A6 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.62□□□□□ -1.51
LRRC40Q9H9A6 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.62□□□□□ -1.51
LRRC40Q9H9A6 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.62□□□□□ -1.51
LRRC40Q9H9A6 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.62□□□□□ -1.51
LRRC40Q9H9A6 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.62□□□□□ -1.51
LRRC40Q9H9A6 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.62□□□□□ -1.51
LRRC40Q9H9A6 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
LRRC40Q9H9A6 AC015660.5-201ENST00000623238 564 ntBASIC5.62□□□□□ -1.51
LRRC40Q9H9A6 MIR193BHG-214ENST00000641765 509 ntBASIC5.62□□□□□ -1.51
LRRC40Q9H9A6 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
LRRC40Q9H9A6 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.62□□□□□ -1.51
LRRC40Q9H9A6 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LRRC40Q9H9A6 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
LRRC40Q9H9A6 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
LRRC40Q9H9A6 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
LRRC40Q9H9A6 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LRRC40Q9H9A6 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LRRC40Q9H9A6 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LRRC40Q9H9A6 LINC02019-201ENST00000608605 2060 ntBASIC5.62□□□□□ -1.51
LRRC40Q9H9A6 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
LRRC40Q9H9A6 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
LRRC40Q9H9A6 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LRRC40Q9H9A6 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LRRC40Q9H9A6 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LRRC40Q9H9A6 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
LRRC40Q9H9A6 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
LRRC40Q9H9A6 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms