Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 SGMS2-202ENST00000394684 6149 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 PCDH9-202ENST00000377865 5709 ntAPPRIS P4 TSL 1 (best) BASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 RABGEF1-203ENST00000439720 3065 ntTSL 2 BASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 MARCH6-204ENST00000503788 2874 ntTSL 2 BASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 AC145138.1-201ENST00000512908 2851 ntBASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 SOX6-211ENST00000528429 2656 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 RABEP1-201ENST00000341923 2490 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 LSM5-208ENST00000450169 2258 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 ICA1L-202ENST00000392237 5173 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 SPTAN1-223ENST00000630866 7498 ntTSL 5 BASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 KIF1B-212ENST00000622724 8588 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 CSMD1-206ENST00000520002 11740 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 CSMD1-216ENST00000602557 11740 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 ZNF736-202ENST00000423484 7119 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 BCL6-201ENST00000232014 2710 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 AL161891.1-201ENST00000621575 4636 ntBASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 SMYD3-218ENST00000630181 1458 ntTSL 2 BASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 ADD2-201ENST00000264436 9267 ntAPPRIS P4 TSL 1 (best) BASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 RPL12P38-202ENST00000588627 2319 ntBASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 KIAA0753-201ENST00000361413 4859 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 HIST1H4F-201ENST00000244537 312 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 AC073343.1-201ENST00000328239 651 ntBASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 RNU6-874P-201ENST00000362390 105 ntBASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 Y_RNA.197-201ENST00000364004 102 ntBASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 Y_RNA.273-201ENST00000364703 102 ntBASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 Y_RNA.350-201ENST00000365409 98 ntBASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 MUC1-206ENST00000368390 804 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 MUC1-209ENST00000368396 516 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 MUC1-210ENST00000368398 729 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 FHL1-203ENST00000370676 833 ntTSL 5 BASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 AC074375.1-201ENST00000372993 192 ntBASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 GAGE12E-201ENST00000381698 520 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 RNY1P5-201ENST00000383890 115 ntBASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 Y_RNA.396-201ENST00000383949 103 ntBASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 SNORA7B-201ENST00000384360 139 ntBASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 SNORA10B-201ENST00000384458 133 ntBASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 SNORA70I-201ENST00000384544 135 ntBASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 RNU6-417P-201ENST00000384712 107 ntBASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 SNRPEP2-201ENST00000397592 279 ntBASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 U3.31-201ENST00000408113 216 ntBASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 REG3G-203ENST00000409471 575 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 RN7SKP32-201ENST00000410167 303 ntBASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 RN7SKP166-201ENST00000410812 305 ntBASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 AL022724.1-201ENST00000412132 554 ntTSL 3 BASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 GJA6P-201ENST00000415117 1042 ntBASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 RPL34P3-201ENST00000421454 338 ntBASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 AL353678.1-201ENST00000422735 741 ntBASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 AL022400.1-201ENST00000423946 935 ntBASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 OR2AS1P-201ENST00000427827 319 ntBASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 MYO5BP3-201ENST00000431872 1279 ntBASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 RPSAP62-201ENST00000432596 833 ntBASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 AC099344.1-201ENST00000433548 492 ntBASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 GAPDHP32-201ENST00000433816 998 ntBASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 ARMC4P1-201ENST00000438905 707 ntBASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 MTND6P18-201ENST00000439477 513 ntBASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 AC027124.1-201ENST00000440852 466 ntBASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 TDRG1-202ENST00000448433 1015 ntTSL 3 BASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 OTX2P1-201ENST00000450956 354 ntBASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 RPS29P5-201ENST00000452777 171 ntBASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 BZW1P1-201ENST00000454901 1240 ntBASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 AC011225.1-201ENST00000457751 369 ntBASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 RPL7P48-201ENST00000461513 746 ntBASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 NDUFB4P1-201ENST00000462398 381 ntBASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 RN7SL19P-201ENST00000462522 306 ntBASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 AC008379.1-201ENST00000463655 464 ntBASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 VN1R17P-201ENST00000472048 1090 ntBASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 AC079944.1-201ENST00000485426 495 ntBASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 AC112219.1-201ENST00000491567 947 ntTSL 3 BASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 LINC02024-202ENST00000493545 483 ntTSL 3 BASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 AC015864.1-201ENST00000496512 544 ntBASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 RPL22-208ENST00000497965 786 ntTSL 2 BASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 AC106822.1-201ENST00000502647 526 ntBASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 AC093821.1-201ENST00000503950 539 ntTSL 4 BASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 AC106760.2-201ENST00000504159 619 ntBASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 AC083902.1-201ENST00000508578 359 ntTSL 5 BASIC2.61□□□□□ -1.99
KRTAP4-3Q9BYR4 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms