Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 PMS2P11-201ENST00000451831 574 ntBASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 AL121877.1-201ENST00000453704 622 ntBASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 RPL12P31-201ENST00000478433 450 ntBASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 RPS4XP15-201ENST00000489210 795 ntBASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 NPM1P27-201ENST00000502784 830 ntBASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 AC008629.2-201ENST00000503783 483 ntBASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 AC091849.1-201ENST00000509920 121 ntBASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 AC026801.2-201ENST00000515352 425 ntBASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 RN7SKP13-201ENST00000515933 244 ntBASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 Y_RNA.704-201ENST00000516851 102 ntBASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 IGLC4-201ENST00000517690 248 ntBASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 ARL2BPP5-201ENST00000523141 481 ntBASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 AC023595.1-201ENST00000536216 564 ntTSL 4 BASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 AC037471.2-201ENST00000564941 598 ntBASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 AC107954.1-201ENST00000565906 727 ntBASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 AL158151.4-201ENST00000600965 507 ntBASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 AC005518.2-201ENST00000603254 282 ntBASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 AC009027.1-201ENST00000604510 479 ntBASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 AL513218.1-201ENST00000606527 391 ntBASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 AC093635.1-201ENST00000609028 555 ntBASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 MILR1-202ENST00000612535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 AC005332.6-201ENST00000613178 446 ntBASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 AC024580.1-201ENST00000623020 674 ntBASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 AC007342.8-201ENST00000623278 678 ntBASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 AC073488.8-201ENST00000631952 757 ntBASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 SYTL4-202ENST00000276141 3737 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 RGS4-204ENST00000421743 3311 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 TEP1-201ENST00000262715 10695 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 LDB2-203ENST00000502640 2626 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 MFSD8-227ENST00000641393 4069 ntBASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 ACTBP13-201ENST00000423971 3959 ntBASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 CCDC113-202ENST00000443128 5110 ntTSL 2 BASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 CPM-202ENST00000546373 2116 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 SLC5A1-204ENST00000543737 4752 ntTSL 2 BASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 ARHGAP1-201ENST00000311956 3375 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 DCAF6-202ENST00000367840 3349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 AC026398.1-201ENST00000413683 3126 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 DPY19L3-205ENST00000586987 5925 ntTSL 5 BASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 ANO2-201ENST00000327087 3720 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 AL034370.1-201ENST00000397254 1590 ntBASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 OR2T10-202ENST00000642090 3519 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 DNAH10-209ENST00000614082 3484 ntTSL 5 BASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 SEMA3C-203ENST00000419255 2415 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 SPATS2L-201ENST00000358677 6156 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 AC127502.2-201ENST00000602663 2351 ntBASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 ZMYND8-219ENST00000611941 5090 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 MTND4P35-201ENST00000604257 1375 ntBASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 TRIM5-201ENST00000380027 2290 ntTSL 5 BASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 LPP-208ENST00000448637 5835 ntTSL 5 BASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 ENPP6-201ENST00000296741 3936 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 MXI1-203ENST00000361248 2188 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 SCRN3-201ENST00000272732 3037 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 LDB3-201ENST00000263066 3873 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 BSPH1-201ENST00000344839 654 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 Y_RNA.86-201ENST00000363020 111 ntBASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 RNA5SP23-201ENST00000391006 105 ntBASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 U3.25-201ENST00000391209 220 ntBASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 OR7E101P-201ENST00000400428 513 ntBASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 AL139805.1-201ENST00000407837 289 ntBASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 AC066692.1-201ENST00000421721 457 ntBASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 AC093084.1-201ENST00000424233 687 ntBASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 RN7SL273P-201ENST00000481561 299 ntBASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 RN7SL413P-201ENST00000482700 297 ntBASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 AC105914.1-201ENST00000511798 226 ntBASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 PSD2-AS1-201ENST00000515306 412 ntTSL 3 BASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 IGLV1-62-201ENST00000518003 441 ntBASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 ELOCP31-201ENST00000540463 467 ntBASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 NXPE2P1-201ENST00000543705 726 ntBASIC7.38□□□□□ -1.23
COL25A1Q9BXS0 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms