Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 CCDC150P1-201ENST00000537123 2215 ntBASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 AL031651.1-201ENST00000615357 1438 ntBASIC5.74□□□□□ -1.49
SSBP3Q9BWW4 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 PPIAP26-201ENST00000377951 522 ntBASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 RNU6-1042P-201ENST00000384204 107 ntBASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 AL589994.1-201ENST00000404962 340 ntBASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 RN7SKP91-201ENST00000410852 288 ntBASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 RN7SKP205-201ENST00000410999 307 ntBASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 AC000089.1-201ENST00000424559 801 ntBASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 C1DP1-201ENST00000426049 402 ntBASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 ISCA1P1-201ENST00000426679 387 ntBASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 UBQLN1P1-207ENST00000441056 1169 ntBASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 IGKV1OR10-1-201ENST00000442306 329 ntBASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 GTF2IP12-201ENST00000456547 356 ntBASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 IGKV1OR22-5-201ENST00000458718 354 ntBASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 AC063955.1-201ENST00000462872 685 ntBASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 AC107015.1-201ENST00000466902 747 ntBASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 RN7SL216P-201ENST00000471607 298 ntBASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 RN7SL790P-201ENST00000474043 298 ntBASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 RPS14P8-201ENST00000478778 369 ntBASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 RN7SL654P-201ENST00000479178 292 ntBASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 AC041039.1-201ENST00000485656 536 ntBASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 SUMO1P1-201ENST00000497904 306 ntBASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 OR5H5P-201ENST00000503164 928 ntBASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 AC112184.1-201ENST00000505179 312 ntBASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 AP001646.1-201ENST00000527936 915 ntBASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 CHEK2P2-201ENST00000554701 672 ntBASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 PPIAP6-201ENST00000557078 499 ntBASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 AC084757.1-201ENST00000559987 490 ntBASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 NPM1P47-201ENST00000560843 856 ntBASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 LINC00556-201ENST00000569603 412 ntBASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 AC090286.3-201ENST00000573133 187 ntBASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 AC027796.1-201ENST00000575593 512 ntBASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 WISP1-OT1-201ENST00000602893 642 ntBASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 AC111186.1-201ENST00000604684 130 ntBASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 AC090186.1-201ENST00000605991 572 ntBASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 AC092954.2-201ENST00000609103 430 ntBASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 AC107075.1-201ENST00000613695 314 ntBASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 U4.5-201ENST00000617137 123 ntBASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 AC005899.6-201ENST00000620729 297 ntBASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 AL450226.2-201ENST00000622913 439 ntBASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 AC005858.3-201ENST00000624756 589 ntBASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 AL512310.3-201ENST00000547023 1335 ntBASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 AL929601.4-201ENST00000613011 1341 ntBASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC5.73□□□□□ -1.49
SSBP3Q9BWW4 ENO1P4-201ENST00000416471 1785 ntBASIC5.72□□□□□ -1.49
SSBP3Q9BWW4 JPX-212ENST00000639185 9658 ntTSL 5 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms