Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
SNX18Q96RF0 AC010132.2-201ENST00000295493 1043 ntBASIC5.65□□□□□ -1.5
SNX18Q96RF0 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
SNX18Q96RF0 RNA5SP232-201ENST00000364144 119 ntBASIC5.65□□□□□ -1.5
SNX18Q96RF0 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.65□□□□□ -1.5
SNX18Q96RF0 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
SNX18Q96RF0 MIR433-201ENST00000384837 93 ntBASIC5.65□□□□□ -1.5
SNX18Q96RF0 RPL10P10-201ENST00000403509 664 ntBASIC5.65□□□□□ -1.5
SNX18Q96RF0 AL356968.2-201ENST00000412769 1257 ntBASIC5.65□□□□□ -1.5
SNX18Q96RF0 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.65□□□□□ -1.5
SNX18Q96RF0 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
SNX18Q96RF0 AL139158.1-201ENST00000424719 340 ntBASIC5.65□□□□□ -1.5
SNX18Q96RF0 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.65□□□□□ -1.5
SNX18Q96RF0 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.65□□□□□ -1.5
SNX18Q96RF0 MTND2P5-201ENST00000432656 1006 ntBASIC5.65□□□□□ -1.5
SNX18Q96RF0 AL035246.1-201ENST00000433554 1255 ntBASIC5.65□□□□□ -1.5
SNX18Q96RF0 AL645939.3-201ENST00000435408 225 ntBASIC5.65□□□□□ -1.5
SNX18Q96RF0 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC5.65□□□□□ -1.5
SNX18Q96RF0 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.65□□□□□ -1.5
SNX18Q96RF0 RPL6P30-201ENST00000443382 862 ntBASIC5.65□□□□□ -1.5
SNX18Q96RF0 RPS27AP3-201ENST00000453803 454 ntBASIC5.65□□□□□ -1.5
SNX18Q96RF0 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC5.65□□□□□ -1.5
SNX18Q96RF0 VPS25P1-201ENST00000455691 508 ntBASIC5.65□□□□□ -1.5
SNX18Q96RF0 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.65□□□□□ -1.5
SNX18Q96RF0 RN7SL643P-201ENST00000471845 291 ntBASIC5.65□□□□□ -1.5
SNX18Q96RF0 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC5.65□□□□□ -1.5
SNX18Q96RF0 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.65□□□□□ -1.5
SNX18Q96RF0 AC018645.1-201ENST00000505003 109 ntBASIC5.65□□□□□ -1.5
SNX18Q96RF0 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC5.65□□□□□ -1.5
SNX18Q96RF0 GUSBP9-201ENST00000510138 584 ntBASIC5.65□□□□□ -1.5
SNX18Q96RF0 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.65□□□□□ -1.5
SNX18Q96RF0 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC5.65□□□□□ -1.5
SNX18Q96RF0 RNA5SP400-201ENST00000517155 111 ntBASIC5.65□□□□□ -1.5
SNX18Q96RF0 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC5.65□□□□□ -1.5
SNX18Q96RF0 AC008429.4-201ENST00000521201 182 ntBASIC5.65□□□□□ -1.5
SNX18Q96RF0 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.65□□□□□ -1.5
SNX18Q96RF0 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC5.65□□□□□ -1.5
SNX18Q96RF0 OR6M2P-201ENST00000529831 871 ntBASIC5.65□□□□□ -1.5
SNX18Q96RF0 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC5.65□□□□□ -1.5
SNX18Q96RF0 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
SNX18Q96RF0 AC121758.1-202ENST00000556917 658 ntBASIC5.65□□□□□ -1.5
SNX18Q96RF0 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.65□□□□□ -1.5
SNX18Q96RF0 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.65□□□□□ -1.5
SNX18Q96RF0 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC5.65□□□□□ -1.5
SNX18Q96RF0 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC5.65□□□□□ -1.5
SNX18Q96RF0 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC5.65□□□□□ -1.5
SNX18Q96RF0 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC5.65□□□□□ -1.5
SNX18Q96RF0 WBP1LP12-201ENST00000604449 331 ntBASIC5.65□□□□□ -1.5
SNX18Q96RF0 MIR7109-201ENST00000613748 65 ntBASIC5.65□□□□□ -1.5
SNX18Q96RF0 uc_338.29-201ENST00000615099 168 ntBASIC5.65□□□□□ -1.5
SNX18Q96RF0 AL669942.2-201ENST00000620352 697 ntBASIC5.65□□□□□ -1.5
SNX18Q96RF0 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.65□□□□□ -1.5
SNX18Q96RF0 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.65□□□□□ -1.5
SNX18Q96RF0 AC132825.7-201ENST00000638744 335 ntBASIC5.65□□□□□ -1.5
SNX18Q96RF0 AC008691.1-209ENST00000642094 814 ntBASIC5.65□□□□□ -1.5
SNX18Q96RF0 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SNX18Q96RF0 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SNX18Q96RF0 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.65□□□□□ -1.51
SNX18Q96RF0 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SNX18Q96RF0 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SNX18Q96RF0 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
SNX18Q96RF0 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.65□□□□□ -1.51
SNX18Q96RF0 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SNX18Q96RF0 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.65□□□□□ -1.51
SNX18Q96RF0 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SNX18Q96RF0 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SNX18Q96RF0 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SNX18Q96RF0 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SNX18Q96RF0 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
SNX18Q96RF0 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SNX18Q96RF0 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.64□□□□□ -1.51
SNX18Q96RF0 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.64□□□□□ -1.51
SNX18Q96RF0 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.64□□□□□ -1.51
SNX18Q96RF0 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SNX18Q96RF0 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.64□□□□□ -1.51
SNX18Q96RF0 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SNX18Q96RF0 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SNX18Q96RF0 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SNX18Q96RF0 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
SNX18Q96RF0 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SNX18Q96RF0 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SNX18Q96RF0 RNU1-84P-201ENST00000365447 164 ntBASIC5.64□□□□□ -1.51
SNX18Q96RF0 RNY3P9-201ENST00000384727 106 ntBASIC5.64□□□□□ -1.51
SNX18Q96RF0 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SNX18Q96RF0 VN1R12P-201ENST00000403778 876 ntBASIC5.64□□□□□ -1.51
SNX18Q96RF0 HMGB3P19-201ENST00000403971 560 ntBASIC5.64□□□□□ -1.51
SNX18Q96RF0 ZNF602P-201ENST00000405929 924 ntBASIC5.64□□□□□ -1.51
SNX18Q96RF0 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.64□□□□□ -1.51
SNX18Q96RF0 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.64□□□□□ -1.51
SNX18Q96RF0 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.64□□□□□ -1.51
SNX18Q96RF0 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC5.64□□□□□ -1.51
SNX18Q96RF0 MED6P1-201ENST00000439659 713 ntBASIC5.64□□□□□ -1.51
SNX18Q96RF0 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5.64□□□□□ -1.51
SNX18Q96RF0 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC5.64□□□□□ -1.51
SNX18Q96RF0 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.64□□□□□ -1.51
SNX18Q96RF0 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.64□□□□□ -1.51
SNX18Q96RF0 MORF4-201ENST00000447135 971 ntBASIC5.64□□□□□ -1.51
SNX18Q96RF0 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.64□□□□□ -1.51
SNX18Q96RF0 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.64□□□□□ -1.51
SNX18Q96RF0 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms