Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.45□□□□□ -1.54
TM9SF4Q92544 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.45□□□□□ -1.54
TM9SF4Q92544 AL049872.1-201ENST00000556323 322 ntBASIC5.45□□□□□ -1.54
TM9SF4Q92544 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.45□□□□□ -1.54
TM9SF4Q92544 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.45□□□□□ -1.54
TM9SF4Q92544 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TM9SF4Q92544 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.45□□□□□ -1.54
TM9SF4Q92544 SDR42E1P1-201ENST00000611327 477 ntBASIC5.45□□□□□ -1.54
TM9SF4Q92544 AL512624.1-201ENST00000613638 469 ntBASIC5.45□□□□□ -1.54
TM9SF4Q92544 RN7SL544P-201ENST00000617232 284 ntBASIC5.45□□□□□ -1.54
TM9SF4Q92544 RN7SL763P-201ENST00000620922 284 ntBASIC5.45□□□□□ -1.54
TM9SF4Q92544 AL391262.2-201ENST00000622466 494 ntBASIC5.45□□□□□ -1.54
TM9SF4Q92544 AL356094.1-201ENST00000624663 1212 ntBASIC5.45□□□□□ -1.54
TM9SF4Q92544 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.45□□□□□ -1.54
TM9SF4Q92544 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
TM9SF4Q92544 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TM9SF4Q92544 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TM9SF4Q92544 AC004076.2-201ENST00000620532 3323 ntBASIC5.45□□□□□ -1.54
TM9SF4Q92544 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TM9SF4Q92544 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.44□□□□□ -1.54
TM9SF4Q92544 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
TM9SF4Q92544 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.44□□□□□ -1.54
TM9SF4Q92544 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TM9SF4Q92544 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.44□□□□□ -1.54
TM9SF4Q92544 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TM9SF4Q92544 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TM9SF4Q92544 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
TM9SF4Q92544 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.44□□□□□ -1.54
TM9SF4Q92544 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TM9SF4Q92544 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TM9SF4Q92544 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.44□□□□□ -1.54
TM9SF4Q92544 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
TM9SF4Q92544 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.44□□□□□ -1.54
TM9SF4Q92544 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.44□□□□□ -1.54
TM9SF4Q92544 AL022331.1-201ENST00000429025 477 ntBASIC5.44□□□□□ -1.54
TM9SF4Q92544 DEFA9P-201ENST00000433042 285 ntBASIC5.44□□□□□ -1.54
TM9SF4Q92544 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.44□□□□□ -1.54
TM9SF4Q92544 SPRYD7P1-201ENST00000443861 570 ntBASIC5.44□□□□□ -1.54
TM9SF4Q92544 AP000281.1-201ENST00000444036 316 ntBASIC5.44□□□□□ -1.54
TM9SF4Q92544 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.44□□□□□ -1.54
TM9SF4Q92544 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.44□□□□□ -1.54
TM9SF4Q92544 RNU4-18P-201ENST00000516751 149 ntBASIC5.44□□□□□ -1.54
TM9SF4Q92544 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TM9SF4Q92544 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TM9SF4Q92544 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.44□□□□□ -1.54
TM9SF4Q92544 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.44□□□□□ -1.54
TM9SF4Q92544 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TM9SF4Q92544 AC015802.2-201ENST00000589690 189 ntBASIC5.44□□□□□ -1.54
TM9SF4Q92544 AC119403.2-201ENST00000590960 598 ntBASIC5.44□□□□□ -1.54
TM9SF4Q92544 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.44□□□□□ -1.54
TM9SF4Q92544 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.44□□□□□ -1.54
TM9SF4Q92544 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.44□□□□□ -1.54
TM9SF4Q92544 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.44□□□□□ -1.54
TM9SF4Q92544 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.44□□□□□ -1.54
TM9SF4Q92544 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.44□□□□□ -1.54
TM9SF4Q92544 AL139254.3-201ENST00000641097 674 ntBASIC5.44□□□□□ -1.54
TM9SF4Q92544 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TM9SF4Q92544 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TM9SF4Q92544 AC016745.2-201ENST00000608834 3443 ntBASIC5.44□□□□□ -1.54
TM9SF4Q92544 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TM9SF4Q92544 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TM9SF4Q92544 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TM9SF4Q92544 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TM9SF4Q92544 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TM9SF4Q92544 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.44□□□□□ -1.54
TM9SF4Q92544 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TM9SF4Q92544 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
TM9SF4Q92544 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TM9SF4Q92544 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.43□□□□□ -1.54
TM9SF4Q92544 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TM9SF4Q92544 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TM9SF4Q92544 AC083843.2-201ENST00000568248 6253 ntBASIC5.43□□□□□ -1.54
TM9SF4Q92544 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.43□□□□□ -1.54
TM9SF4Q92544 UGT2B24P-201ENST00000514441 1597 ntBASIC5.43□□□□□ -1.54
TM9SF4Q92544 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.43□□□□□ -1.54
TM9SF4Q92544 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
TM9SF4Q92544 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TM9SF4Q92544 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TM9SF4Q92544 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TM9SF4Q92544 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TM9SF4Q92544 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
TM9SF4Q92544 RNA5SP132-201ENST00000364725 118 ntBASIC5.43□□□□□ -1.54
TM9SF4Q92544 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TM9SF4Q92544 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.43□□□□□ -1.54
TM9SF4Q92544 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
TM9SF4Q92544 HMGB1P20-201ENST00000402555 677 ntBASIC5.43□□□□□ -1.54
TM9SF4Q92544 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.43□□□□□ -1.54
TM9SF4Q92544 AP000534.2-201ENST00000412729 568 ntBASIC5.43□□□□□ -1.54
TM9SF4Q92544 BMS1P17-202ENST00000416720 316 ntBASIC5.43□□□□□ -1.54
TM9SF4Q92544 AC106901.1-201ENST00000425086 698 ntBASIC5.43□□□□□ -1.54
TM9SF4Q92544 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.43□□□□□ -1.54
TM9SF4Q92544 Z84478.1-201ENST00000438230 1219 ntBASIC5.43□□□□□ -1.54
TM9SF4Q92544 SUMO2P3-201ENST00000438311 288 ntBASIC5.43□□□□□ -1.54
TM9SF4Q92544 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.43□□□□□ -1.54
TM9SF4Q92544 RAD1P2-201ENST00000446414 663 ntBASIC5.43□□□□□ -1.54
TM9SF4Q92544 AC073909.1-201ENST00000447112 999 ntBASIC5.43□□□□□ -1.54
TM9SF4Q92544 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.43□□□□□ -1.54
TM9SF4Q92544 AC090602.1-201ENST00000469695 252 ntBASIC5.43□□□□□ -1.54
TM9SF4Q92544 AC012123.2-201ENST00000485809 248 ntBASIC5.43□□□□□ -1.54
TM9SF4Q92544 MORF4L2P1-201ENST00000503761 858 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms