Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 RNU2-17P-201ENST00000410290 190 ntBASIC5.68□□□□□ -1.5
CPEB3Q8NE35 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.68□□□□□ -1.5
CPEB3Q8NE35 RAP1BP1-201ENST00000412709 553 ntBASIC5.68□□□□□ -1.5
CPEB3Q8NE35 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC5.68□□□□□ -1.5
CPEB3Q8NE35 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC5.68□□□□□ -1.5
CPEB3Q8NE35 TIMM9P2-201ENST00000419324 266 ntBASIC5.68□□□□□ -1.5
CPEB3Q8NE35 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC5.68□□□□□ -1.5
CPEB3Q8NE35 CYCSP52-201ENST00000422857 310 ntBASIC5.68□□□□□ -1.5
CPEB3Q8NE35 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CPEB3Q8NE35 PNRC2P1-201ENST00000423940 420 ntBASIC5.68□□□□□ -1.5
CPEB3Q8NE35 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC5.68□□□□□ -1.5
CPEB3Q8NE35 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC5.68□□□□□ -1.5
CPEB3Q8NE35 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC5.68□□□□□ -1.5
CPEB3Q8NE35 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC5.68□□□□□ -1.5
CPEB3Q8NE35 EEF1A1P39-201ENST00000440791 250 ntBASIC5.68□□□□□ -1.5
CPEB3Q8NE35 AL031681.1-201ENST00000443304 400 ntBASIC5.68□□□□□ -1.5
CPEB3Q8NE35 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC5.68□□□□□ -1.5
CPEB3Q8NE35 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC5.68□□□□□ -1.5
CPEB3Q8NE35 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.68□□□□□ -1.5
CPEB3Q8NE35 PTENP1-201ENST00000447117 1215 ntBASIC5.68□□□□□ -1.5
CPEB3Q8NE35 RNF148-202ENST00000447240 839 ntTSL 2 BASIC5.68□□□□□ -1.5
CPEB3Q8NE35 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CPEB3Q8NE35 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.68□□□□□ -1.5
CPEB3Q8NE35 AL096803.2-201ENST00000450032 677 ntBASIC5.68□□□□□ -1.5
CPEB3Q8NE35 USP9YP25-201ENST00000457708 443 ntBASIC5.68□□□□□ -1.5
CPEB3Q8NE35 AC004815.1-201ENST00000484185 331 ntBASIC5.68□□□□□ -1.5
CPEB3Q8NE35 AC079203.1-201ENST00000487972 404 ntBASIC5.68□□□□□ -1.5
CPEB3Q8NE35 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CPEB3Q8NE35 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.68□□□□□ -1.5
CPEB3Q8NE35 RN7SKP248-201ENST00000516278 305 ntBASIC5.68□□□□□ -1.5
CPEB3Q8NE35 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC5.68□□□□□ -1.5
CPEB3Q8NE35 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC5.68□□□□□ -1.5
CPEB3Q8NE35 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC5.68□□□□□ -1.5
CPEB3Q8NE35 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.68□□□□□ -1.5
CPEB3Q8NE35 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CPEB3Q8NE35 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC5.68□□□□□ -1.5
CPEB3Q8NE35 AC023813.2-201ENST00000564321 469 ntBASIC5.68□□□□□ -1.5
CPEB3Q8NE35 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC5.68□□□□□ -1.5
CPEB3Q8NE35 AC021483.2-201ENST00000567415 758 ntBASIC5.68□□□□□ -1.5
CPEB3Q8NE35 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC5.68□□□□□ -1.5
CPEB3Q8NE35 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC5.68□□□□□ -1.5
CPEB3Q8NE35 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC5.68□□□□□ -1.5
CPEB3Q8NE35 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC5.68□□□□□ -1.5
CPEB3Q8NE35 AC097467.4-201ENST00000605504 141 ntBASIC5.68□□□□□ -1.5
CPEB3Q8NE35 AC025175.1-201ENST00000606482 759 ntBASIC5.68□□□□□ -1.5
CPEB3Q8NE35 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CPEB3Q8NE35 MIR6885-201ENST00000612241 66 ntBASIC5.68□□□□□ -1.5
CPEB3Q8NE35 AC015922.4-201ENST00000612568 690 ntBASIC5.68□□□□□ -1.5
CPEB3Q8NE35 RMST_5.1-201ENST00000618704 126 ntBASIC5.68□□□□□ -1.5
CPEB3Q8NE35 MRPL57P1-201ENST00000621486 265 ntBASIC5.68□□□□□ -1.5
CPEB3Q8NE35 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CPEB3Q8NE35 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.68□□□□□ -1.5
CPEB3Q8NE35 AL357140.4-201ENST00000636827 412 ntBASIC5.68□□□□□ -1.5
CPEB3Q8NE35 MIR1322-201ENST00000638013 71 ntBASIC5.68□□□□□ -1.5
CPEB3Q8NE35 AL121936.2-201ENST00000641935 662 ntBASIC5.68□□□□□ -1.5
CPEB3Q8NE35 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CPEB3Q8NE35 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CPEB3Q8NE35 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.68□□□□□ -1.5
CPEB3Q8NE35 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.68□□□□□ -1.5
CPEB3Q8NE35 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CPEB3Q8NE35 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CPEB3Q8NE35 EEF1A1P12-201ENST00000443590 1346 ntBASIC5.68□□□□□ -1.5
CPEB3Q8NE35 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CPEB3Q8NE35 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CPEB3Q8NE35 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CPEB3Q8NE35 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CPEB3Q8NE35 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CPEB3Q8NE35 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CPEB3Q8NE35 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CPEB3Q8NE35 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CPEB3Q8NE35 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CPEB3Q8NE35 YES1P1-201ENST00000418510 1628 ntBASIC5.67□□□□□ -1.5
CPEB3Q8NE35 ELL2P3-201ENST00000457883 1602 ntBASIC5.67□□□□□ -1.5
CPEB3Q8NE35 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.67□□□□□ -1.5
CPEB3Q8NE35 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CPEB3Q8NE35 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CPEB3Q8NE35 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CPEB3Q8NE35 LRRC37A16P-202ENST00000586022 3725 ntBASIC5.67□□□□□ -1.5
CPEB3Q8NE35 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CPEB3Q8NE35 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CPEB3Q8NE35 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC5.67□□□□□ -1.5
CPEB3Q8NE35 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CPEB3Q8NE35 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CPEB3Q8NE35 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC5.67□□□□□ -1.5
CPEB3Q8NE35 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CPEB3Q8NE35 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CPEB3Q8NE35 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.67□□□□□ -1.5
CPEB3Q8NE35 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CPEB3Q8NE35 RNA5SP188-201ENST00000362916 129 ntBASIC5.67□□□□□ -1.5
CPEB3Q8NE35 RNU6-236P-201ENST00000363886 106 ntBASIC5.67□□□□□ -1.5
CPEB3Q8NE35 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
CPEB3Q8NE35 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5.67□□□□□ -1.5
CPEB3Q8NE35 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CPEB3Q8NE35 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CPEB3Q8NE35 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.67□□□□□ -1.5
CPEB3Q8NE35 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CPEB3Q8NE35 UBTFL2-201ENST00000411859 1191 ntBASIC5.67□□□□□ -1.5
CPEB3Q8NE35 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.67□□□□□ -1.5
CPEB3Q8NE35 AL356320.2-201ENST00000417263 507 ntBASIC5.67□□□□□ -1.5
CPEB3Q8NE35 ELOCP9-201ENST00000418624 239 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms