Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.29□□□□□ -1.4
CCDC33Q8N5R6 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC33Q8N5R6 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC33Q8N5R6 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC6.29□□□□□ -1.4
CCDC33Q8N5R6 MIR620-201ENST00000385232 95 ntBASIC6.29□□□□□ -1.4
CCDC33Q8N5R6 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC33Q8N5R6 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC33Q8N5R6 AL121977.1-201ENST00000401636 979 ntBASIC6.29□□□□□ -1.4
CCDC33Q8N5R6 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.29□□□□□ -1.4
CCDC33Q8N5R6 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC6.29□□□□□ -1.4
CCDC33Q8N5R6 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC33Q8N5R6 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.29□□□□□ -1.4
CCDC33Q8N5R6 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.29□□□□□ -1.4
CCDC33Q8N5R6 AL161636.2-201ENST00000445179 927 ntBASIC6.29□□□□□ -1.4
CCDC33Q8N5R6 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.29□□□□□ -1.4
CCDC33Q8N5R6 MOB1AP2-201ENST00000446060 614 ntBASIC6.29□□□□□ -1.4
CCDC33Q8N5R6 ZNF619P1-201ENST00000446539 752 ntBASIC6.29□□□□□ -1.4
CCDC33Q8N5R6 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.29□□□□□ -1.4
CCDC33Q8N5R6 AL161722.1-201ENST00000446972 1032 ntBASIC6.29□□□□□ -1.4
CCDC33Q8N5R6 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC6.29□□□□□ -1.4
CCDC33Q8N5R6 AC092691.2-201ENST00000461787 803 ntBASIC6.29□□□□□ -1.4
CCDC33Q8N5R6 AL355032.1-201ENST00000472981 438 ntBASIC6.29□□□□□ -1.4
CCDC33Q8N5R6 UBFD1P1-201ENST00000473259 814 ntBASIC6.29□□□□□ -1.4
CCDC33Q8N5R6 AC074386.1-201ENST00000476560 767 ntBASIC6.29□□□□□ -1.4
CCDC33Q8N5R6 AC098583.1-201ENST00000480875 255 ntBASIC6.29□□□□□ -1.4
CCDC33Q8N5R6 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC6.29□□□□□ -1.4
CCDC33Q8N5R6 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
CCDC33Q8N5R6 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC6.29□□□□□ -1.4
CCDC33Q8N5R6 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.29□□□□□ -1.4
CCDC33Q8N5R6 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.29□□□□□ -1.4
CCDC33Q8N5R6 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.29□□□□□ -1.4
CCDC33Q8N5R6 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC33Q8N5R6 AC027544.3-201ENST00000535082 757 ntBASIC6.29□□□□□ -1.4
CCDC33Q8N5R6 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.29□□□□□ -1.4
CCDC33Q8N5R6 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC6.29□□□□□ -1.4
CCDC33Q8N5R6 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC33Q8N5R6 AP005119.1-201ENST00000580956 292 ntBASIC6.29□□□□□ -1.4
CCDC33Q8N5R6 AC141002.1-201ENST00000607025 279 ntBASIC6.29□□□□□ -1.4
CCDC33Q8N5R6 AC007683.2-201ENST00000624681 714 ntBASIC6.29□□□□□ -1.4
CCDC33Q8N5R6 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC6.29□□□□□ -1.4
CCDC33Q8N5R6 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC33Q8N5R6 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC33Q8N5R6 HSPA8P19-201ENST00000505359 1517 ntBASIC6.29□□□□□ -1.4
CCDC33Q8N5R6 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
CCDC33Q8N5R6 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC33Q8N5R6 AC024651.2-201ENST00000562480 2098 ntBASIC6.29□□□□□ -1.4
CCDC33Q8N5R6 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.28□□□□□ -1.4
CCDC33Q8N5R6 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC33Q8N5R6 MSL3P1-202ENST00000440028 1468 ntBASIC6.28□□□□□ -1.4
CCDC33Q8N5R6 AL359955.1-201ENST00000455242 3275 ntBASIC6.28□□□□□ -1.4
CCDC33Q8N5R6 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.28□□□□□ -1.4
CCDC33Q8N5R6 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
CCDC33Q8N5R6 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
CCDC33Q8N5R6 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC33Q8N5R6 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC33Q8N5R6 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC33Q8N5R6 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC33Q8N5R6 OR52B3P-201ENST00000314715 928 ntBASIC6.28□□□□□ -1.4
CCDC33Q8N5R6 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC33Q8N5R6 GNG5P2-201ENST00000372054 207 ntBASIC6.28□□□□□ -1.4
CCDC33Q8N5R6 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
CCDC33Q8N5R6 RNA5SP105-201ENST00000391123 113 ntBASIC6.28□□□□□ -1.4
CCDC33Q8N5R6 AL096800.1-201ENST00000405326 893 ntBASIC6.28□□□□□ -1.4
CCDC33Q8N5R6 RN7SKP151-201ENST00000410230 316 ntBASIC6.28□□□□□ -1.4
CCDC33Q8N5R6 RNA5SP178-201ENST00000410380 128 ntBASIC6.28□□□□□ -1.4
CCDC33Q8N5R6 RPS7P8-201ENST00000418311 581 ntBASIC6.28□□□□□ -1.4
CCDC33Q8N5R6 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.28□□□□□ -1.4
CCDC33Q8N5R6 MTCYBP7-201ENST00000419540 1134 ntBASIC6.28□□□□□ -1.4
CCDC33Q8N5R6 AC079355.1-201ENST00000421770 223 ntBASIC6.28□□□□□ -1.4
CCDC33Q8N5R6 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.28□□□□□ -1.4
CCDC33Q8N5R6 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.28□□□□□ -1.4
CCDC33Q8N5R6 Z84478.1-201ENST00000438230 1219 ntBASIC6.28□□□□□ -1.4
CCDC33Q8N5R6 RPL36AP39-201ENST00000445859 318 ntBASIC6.28□□□□□ -1.4
CCDC33Q8N5R6 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.28□□□□□ -1.4
CCDC33Q8N5R6 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC6.28□□□□□ -1.4
CCDC33Q8N5R6 NPM1P29-201ENST00000483112 803 ntBASIC6.28□□□□□ -1.4
CCDC33Q8N5R6 RN7SL193P-201ENST00000491708 276 ntBASIC6.28□□□□□ -1.4
CCDC33Q8N5R6 SUMO1P1-201ENST00000497904 306 ntBASIC6.28□□□□□ -1.4
CCDC33Q8N5R6 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.28□□□□□ -1.4
CCDC33Q8N5R6 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.28□□□□□ -1.4
CCDC33Q8N5R6 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.28□□□□□ -1.4
CCDC33Q8N5R6 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.28□□□□□ -1.4
CCDC33Q8N5R6 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC6.28□□□□□ -1.4
CCDC33Q8N5R6 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC6.28□□□□□ -1.4
CCDC33Q8N5R6 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.28□□□□□ -1.4
CCDC33Q8N5R6 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC6.28□□□□□ -1.4
CCDC33Q8N5R6 C1GALT1P1-201ENST00000548895 1089 ntBASIC6.28□□□□□ -1.4
CCDC33Q8N5R6 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.28□□□□□ -1.4
CCDC33Q8N5R6 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.28□□□□□ -1.4
CCDC33Q8N5R6 AC090651.1-201ENST00000567865 634 ntBASIC6.28□□□□□ -1.4
CCDC33Q8N5R6 FAM106CP-201ENST00000582212 507 ntBASIC6.28□□□□□ -1.4
CCDC33Q8N5R6 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC6.28□□□□□ -1.4
CCDC33Q8N5R6 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC6.28□□□□□ -1.4
CCDC33Q8N5R6 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC33Q8N5R6 AC109309.2-201ENST00000612597 332 ntBASIC6.28□□□□□ -1.4
CCDC33Q8N5R6 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC6.28□□□□□ -1.4
CCDC33Q8N5R6 AC092159.4-201ENST00000624944 550 ntBASIC6.28□□□□□ -1.4
CCDC33Q8N5R6 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.28□□□□□ -1.4
CCDC33Q8N5R6 FRG1DP-201ENST00000635586 771 ntBASIC6.28□□□□□ -1.4
CCDC33Q8N5R6 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms