Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.64□□□□□ -1.51
CDKL3Q8IVW4 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.64□□□□□ -1.51
CDKL3Q8IVW4 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.64□□□□□ -1.51
CDKL3Q8IVW4 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.64□□□□□ -1.51
CDKL3Q8IVW4 RBM22P12-201ENST00000567098 1255 ntBASIC5.64□□□□□ -1.51
CDKL3Q8IVW4 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.64□□□□□ -1.51
CDKL3Q8IVW4 AC010487.1-201ENST00000594408 1172 ntBASIC5.64□□□□□ -1.51
CDKL3Q8IVW4 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.64□□□□□ -1.51
CDKL3Q8IVW4 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.64□□□□□ -1.51
CDKL3Q8IVW4 AL356608.1-201ENST00000610034 820 ntBASIC5.64□□□□□ -1.51
CDKL3Q8IVW4 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.64□□□□□ -1.51
CDKL3Q8IVW4 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.64□□□□□ -1.51
CDKL3Q8IVW4 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDKL3Q8IVW4 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.64□□□□□ -1.51
CDKL3Q8IVW4 AC073869.8-201ENST00000641806 335 ntBASIC5.64□□□□□ -1.51
CDKL3Q8IVW4 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDKL3Q8IVW4 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
CDKL3Q8IVW4 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.64□□□□□ -1.51
CDKL3Q8IVW4 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.64□□□□□ -1.51
CDKL3Q8IVW4 AP001029.2-203ENST00000589795 4910 ntBASIC5.64□□□□□ -1.51
CDKL3Q8IVW4 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.64□□□□□ -1.51
CDKL3Q8IVW4 OR13C1P-202ENST00000641378 2919 ntBASIC5.64□□□□□ -1.51
CDKL3Q8IVW4 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CDKL3Q8IVW4 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CDKL3Q8IVW4 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDKL3Q8IVW4 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CDKL3Q8IVW4 AC007342.5-201ENST00000571340 2142 ntBASIC5.63□□□□□ -1.51
CDKL3Q8IVW4 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CDKL3Q8IVW4 AC109446.4-201ENST00000623235 2755 ntBASIC5.63□□□□□ -1.51
CDKL3Q8IVW4 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDKL3Q8IVW4 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CDKL3Q8IVW4 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDKL3Q8IVW4 AC006484.1-201ENST00000435086 1884 ntBASIC5.63□□□□□ -1.51
CDKL3Q8IVW4 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDKL3Q8IVW4 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
CDKL3Q8IVW4 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CDKL3Q8IVW4 RN7SKP6-201ENST00000364795 319 ntBASIC5.63□□□□□ -1.51
CDKL3Q8IVW4 RN7SKP69-201ENST00000365390 305 ntBASIC5.63□□□□□ -1.51
CDKL3Q8IVW4 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDKL3Q8IVW4 SNORA5.1-201ENST00000384275 131 ntBASIC5.63□□□□□ -1.51
CDKL3Q8IVW4 PEX12P1-201ENST00000400284 1048 ntBASIC5.63□□□□□ -1.51
CDKL3Q8IVW4 OR2AT2P-201ENST00000413438 905 ntBASIC5.63□□□□□ -1.51
CDKL3Q8IVW4 EEF1B2P8-201ENST00000414101 671 ntBASIC5.63□□□□□ -1.51
CDKL3Q8IVW4 RPL34P3-201ENST00000421454 338 ntBASIC5.63□□□□□ -1.51
CDKL3Q8IVW4 AL133173.1-201ENST00000423458 397 ntBASIC5.63□□□□□ -1.51
CDKL3Q8IVW4 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.63□□□□□ -1.51
CDKL3Q8IVW4 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.63□□□□□ -1.51
CDKL3Q8IVW4 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.63□□□□□ -1.51
CDKL3Q8IVW4 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.63□□□□□ -1.51
CDKL3Q8IVW4 AC090589.1-201ENST00000473109 362 ntBASIC5.63□□□□□ -1.51
CDKL3Q8IVW4 PFN1P8-201ENST00000497012 543 ntBASIC5.63□□□□□ -1.51
CDKL3Q8IVW4 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CDKL3Q8IVW4 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.63□□□□□ -1.51
CDKL3Q8IVW4 AC027216.1-201ENST00000577726 685 ntBASIC5.63□□□□□ -1.51
CDKL3Q8IVW4 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.63□□□□□ -1.51
CDKL3Q8IVW4 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.63□□□□□ -1.51
CDKL3Q8IVW4 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC5.63□□□□□ -1.51
CDKL3Q8IVW4 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.63□□□□□ -1.51
CDKL3Q8IVW4 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.63□□□□□ -1.51
CDKL3Q8IVW4 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.63□□□□□ -1.51
CDKL3Q8IVW4 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDKL3Q8IVW4 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDKL3Q8IVW4 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.62□□□□□ -1.51
CDKL3Q8IVW4 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDKL3Q8IVW4 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CDKL3Q8IVW4 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.62□□□□□ -1.51
CDKL3Q8IVW4 AC093671.1-201ENST00000624981 2929 ntBASIC5.62□□□□□ -1.51
CDKL3Q8IVW4 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CDKL3Q8IVW4 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CDKL3Q8IVW4 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.62□□□□□ -1.51
CDKL3Q8IVW4 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.62□□□□□ -1.51
CDKL3Q8IVW4 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDKL3Q8IVW4 CXADRP1-201ENST00000398098 1095 ntBASIC5.62□□□□□ -1.51
CDKL3Q8IVW4 LYPLA1P3-201ENST00000402650 695 ntBASIC5.62□□□□□ -1.51
CDKL3Q8IVW4 SLC20A1P1-201ENST00000413906 956 ntBASIC5.62□□□□□ -1.51
CDKL3Q8IVW4 AC079809.1-201ENST00000415468 276 ntBASIC5.62□□□□□ -1.51
CDKL3Q8IVW4 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.62□□□□□ -1.51
CDKL3Q8IVW4 AC093155.2-201ENST00000420734 937 ntBASIC5.62□□□□□ -1.51
CDKL3Q8IVW4 AL662874.1-201ENST00000426065 230 ntBASIC5.62□□□□□ -1.51
CDKL3Q8IVW4 VTI1BP4-201ENST00000427516 527 ntBASIC5.62□□□□□ -1.51
CDKL3Q8IVW4 BX119321.1-201ENST00000428912 797 ntBASIC5.62□□□□□ -1.51
CDKL3Q8IVW4 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.62□□□□□ -1.51
CDKL3Q8IVW4 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.62□□□□□ -1.51
CDKL3Q8IVW4 Z84478.1-201ENST00000438230 1219 ntBASIC5.62□□□□□ -1.51
CDKL3Q8IVW4 AL450023.1-201ENST00000450868 751 ntBASIC5.62□□□□□ -1.51
CDKL3Q8IVW4 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.62□□□□□ -1.51
CDKL3Q8IVW4 AP000797.2-201ENST00000475768 606 ntBASIC5.62□□□□□ -1.51
CDKL3Q8IVW4 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC5.62□□□□□ -1.51
CDKL3Q8IVW4 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.62□□□□□ -1.51
CDKL3Q8IVW4 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.62□□□□□ -1.51
CDKL3Q8IVW4 AC109464.1-201ENST00000511091 819 ntBASIC5.62□□□□□ -1.51
CDKL3Q8IVW4 AC021193.1-201ENST00000511607 420 ntBASIC5.62□□□□□ -1.51
CDKL3Q8IVW4 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CDKL3Q8IVW4 AC005363.1-201ENST00000530779 351 ntBASIC5.62□□□□□ -1.51
CDKL3Q8IVW4 NANOGNBP2-201ENST00000544753 553 ntBASIC5.62□□□□□ -1.51
CDKL3Q8IVW4 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.62□□□□□ -1.51
CDKL3Q8IVW4 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.62□□□□□ -1.51
CDKL3Q8IVW4 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.62□□□□□ -1.51
CDKL3Q8IVW4 AP005403.1-201ENST00000579720 229 ntBASIC5.62□□□□□ -1.51
CDKL3Q8IVW4 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms