Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AL138960.1-201ENST00000613838 513 ntBASIC6.35□□□□□ -1.39
HERC6Q8IVU3 AC073575.2-201ENST00000614212 627 ntBASIC6.35□□□□□ -1.39
HERC6Q8IVU3 RPSAP73-201ENST00000614820 330 ntBASIC6.35□□□□□ -1.39
HERC6Q8IVU3 MIR8080-201ENST00000622224 89 ntBASIC6.35□□□□□ -1.39
HERC6Q8IVU3 CCL14-204ENST00000622526 472 ntTSL 3 BASIC6.35□□□□□ -1.39
HERC6Q8IVU3 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC6.35□□□□□ -1.39
HERC6Q8IVU3 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.35□□□□□ -1.39
HERC6Q8IVU3 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.35□□□□□ -1.39
HERC6Q8IVU3 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.35□□□□□ -1.39
HERC6Q8IVU3 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HERC6Q8IVU3 SRRM1P3-201ENST00000426911 2678 ntBASIC6.35□□□□□ -1.39
HERC6Q8IVU3 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HERC6Q8IVU3 AL161756.3-201ENST00000641216 2071 ntBASIC6.35□□□□□ -1.39
HERC6Q8IVU3 CYP4Z2P-201ENST00000423332 1512 ntBASIC6.35□□□□□ -1.39
HERC6Q8IVU3 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HERC6Q8IVU3 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HERC6Q8IVU3 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
HERC6Q8IVU3 AC114786.1-201ENST00000512892 1415 ntBASIC6.34□□□□□ -1.39
HERC6Q8IVU3 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
HERC6Q8IVU3 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
HERC6Q8IVU3 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
HERC6Q8IVU3 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
HERC6Q8IVU3 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
HERC6Q8IVU3 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC6.34□□□□□ -1.39
HERC6Q8IVU3 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.34□□□□□ -1.39
HERC6Q8IVU3 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HERC6Q8IVU3 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HERC6Q8IVU3 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
HERC6Q8IVU3 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HERC6Q8IVU3 RNA5SP507-201ENST00000363603 121 ntBASIC6.34□□□□□ -1.39
HERC6Q8IVU3 SNORD8-201ENST00000363915 110 ntBASIC6.34□□□□□ -1.39
HERC6Q8IVU3 MIR223-201ENST00000385204 110 ntBASIC6.34□□□□□ -1.39
HERC6Q8IVU3 AC136624.1-201ENST00000400791 413 ntBASIC6.34□□□□□ -1.39
HERC6Q8IVU3 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.34□□□□□ -1.39
HERC6Q8IVU3 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC6.34□□□□□ -1.39
HERC6Q8IVU3 RPL35AP24-201ENST00000413846 330 ntBASIC6.34□□□□□ -1.39
HERC6Q8IVU3 RPL23AP27-201ENST00000415161 451 ntBASIC6.34□□□□□ -1.39
HERC6Q8IVU3 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.34□□□□□ -1.39
HERC6Q8IVU3 AC099677.3-201ENST00000427081 395 ntBASIC6.34□□□□□ -1.39
HERC6Q8IVU3 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC6.34□□□□□ -1.39
HERC6Q8IVU3 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.34□□□□□ -1.39
HERC6Q8IVU3 MTND4LP7-201ENST00000431728 294 ntBASIC6.34□□□□□ -1.39
HERC6Q8IVU3 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC6.34□□□□□ -1.39
HERC6Q8IVU3 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC6.34□□□□□ -1.39
HERC6Q8IVU3 AL645937.3-201ENST00000453647 936 ntBASIC6.34□□□□□ -1.39
HERC6Q8IVU3 FRG2FP-204ENST00000453982 852 ntBASIC6.34□□□□□ -1.39
HERC6Q8IVU3 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC6.34□□□□□ -1.39
HERC6Q8IVU3 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC6.34□□□□□ -1.39
HERC6Q8IVU3 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC6.34□□□□□ -1.39
HERC6Q8IVU3 SETP12-201ENST00000514068 805 ntBASIC6.34□□□□□ -1.39
HERC6Q8IVU3 SCARNA6.1-201ENST00000516989 238 ntBASIC6.34□□□□□ -1.39
HERC6Q8IVU3 RNU6-467P-201ENST00000517027 110 ntBASIC6.34□□□□□ -1.39
HERC6Q8IVU3 CDC42P3-201ENST00000518493 633 ntBASIC6.34□□□□□ -1.39
HERC6Q8IVU3 NRBF2P4-201ENST00000520874 850 ntBASIC6.34□□□□□ -1.39
HERC6Q8IVU3 OR10D4P-201ENST00000525892 951 ntBASIC6.34□□□□□ -1.39
HERC6Q8IVU3 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.34□□□□□ -1.39
HERC6Q8IVU3 AC008126.1-201ENST00000549019 480 ntBASIC6.34□□□□□ -1.39
HERC6Q8IVU3 MIR4260-201ENST00000583107 67 ntBASIC6.34□□□□□ -1.39
HERC6Q8IVU3 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
HERC6Q8IVU3 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC6.34□□□□□ -1.39
HERC6Q8IVU3 AC010245.2-201ENST00000606908 1167 ntBASIC6.34□□□□□ -1.39
HERC6Q8IVU3 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
HERC6Q8IVU3 AC003992.1-201ENST00000635364 557 ntBASIC6.34□□□□□ -1.39
HERC6Q8IVU3 OR11H2-202ENST00000641517 1085 ntBASIC6.34□□□□□ -1.39
HERC6Q8IVU3 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
HERC6Q8IVU3 DDX18P6-201ENST00000450119 1997 ntBASIC6.34□□□□□ -1.39
HERC6Q8IVU3 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
HERC6Q8IVU3 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.34□□□□□ -1.39
HERC6Q8IVU3 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.34□□□□□ -1.39
HERC6Q8IVU3 AC092692.1-201ENST00000623625 2595 ntBASIC6.34□□□□□ -1.39
HERC6Q8IVU3 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
HERC6Q8IVU3 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.34□□□□□ -1.4
HERC6Q8IVU3 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.34□□□□□ -1.4
HERC6Q8IVU3 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
HERC6Q8IVU3 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HERC6Q8IVU3 AC025470.1-201ENST00000510053 2032 ntBASIC6.33□□□□□ -1.4
HERC6Q8IVU3 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
HERC6Q8IVU3 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.33□□□□□ -1.4
HERC6Q8IVU3 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
HERC6Q8IVU3 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HERC6Q8IVU3 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HERC6Q8IVU3 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
HERC6Q8IVU3 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
HERC6Q8IVU3 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.33□□□□□ -1.4
HERC6Q8IVU3 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HERC6Q8IVU3 AL133270.1-201ENST00000402635 279 ntBASIC6.33□□□□□ -1.4
HERC6Q8IVU3 AC116036.1-201ENST00000412199 367 ntBASIC6.33□□□□□ -1.4
HERC6Q8IVU3 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC6.33□□□□□ -1.4
HERC6Q8IVU3 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HERC6Q8IVU3 AC113412.1-201ENST00000425840 504 ntBASIC6.33□□□□□ -1.4
HERC6Q8IVU3 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC6.33□□□□□ -1.4
HERC6Q8IVU3 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC6.33□□□□□ -1.4
HERC6Q8IVU3 OR7E116P-201ENST00000448529 957 ntBASIC6.33□□□□□ -1.4
HERC6Q8IVU3 RANP1-206ENST00000455094 651 ntBASIC6.33□□□□□ -1.4
HERC6Q8IVU3 RN7SL172P-201ENST00000460535 303 ntBASIC6.33□□□□□ -1.4
HERC6Q8IVU3 RN7SL583P-201ENST00000475692 287 ntBASIC6.33□□□□□ -1.4
HERC6Q8IVU3 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.33□□□□□ -1.4
HERC6Q8IVU3 RPL7P39-201ENST00000481157 744 ntBASIC6.33□□□□□ -1.4
HERC6Q8IVU3 EIF1P7-201ENST00000487533 337 ntBASIC6.33□□□□□ -1.4
HERC6Q8IVU3 AC004453.1-201ENST00000487895 408 ntBASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms