Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 MAK-202ENST00000354489 3941 ntTSL 5 BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 AL034417.4-202ENST00000642135 2236 ntBASIC6.39□□□□□ -1.39
ATG4DQ86TL0 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 AC092111.1-201ENST00000618256 3358 ntBASIC6.39□□□□□ -1.39
ATG4DQ86TL0 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
ATG4DQ86TL0 UG0898H09-202ENST00000623646 7040 ntBASIC6.38□□□□□ -1.39
ATG4DQ86TL0 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC6.38□□□□□ -1.39
ATG4DQ86TL0 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.38□□□□□ -1.39
ATG4DQ86TL0 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
ATG4DQ86TL0 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC6.38□□□□□ -1.39
ATG4DQ86TL0 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
ATG4DQ86TL0 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.38□□□□□ -1.39
ATG4DQ86TL0 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
ATG4DQ86TL0 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
ATG4DQ86TL0 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
ATG4DQ86TL0 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
ATG4DQ86TL0 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
ATG4DQ86TL0 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
ATG4DQ86TL0 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
ATG4DQ86TL0 MIR181A1-201ENST00000385026 110 ntBASIC6.38□□□□□ -1.39
ATG4DQ86TL0 AL139100.1-201ENST00000408001 498 ntBASIC6.38□□□□□ -1.39
ATG4DQ86TL0 AC002524.1-201ENST00000411687 547 ntBASIC6.38□□□□□ -1.39
ATG4DQ86TL0 RPS20P15-201ENST00000412792 311 ntBASIC6.38□□□□□ -1.39
ATG4DQ86TL0 VDAC1P10-201ENST00000416715 891 ntBASIC6.38□□□□□ -1.39
ATG4DQ86TL0 MTCYBP24-201ENST00000420387 1106 ntBASIC6.38□□□□□ -1.39
ATG4DQ86TL0 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC6.38□□□□□ -1.39
ATG4DQ86TL0 GLRXP1-201ENST00000423261 334 ntBASIC6.38□□□□□ -1.39
ATG4DQ86TL0 HNRNPA1P29-201ENST00000426409 879 ntBASIC6.38□□□□□ -1.39
ATG4DQ86TL0 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.38□□□□□ -1.39
ATG4DQ86TL0 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC6.38□□□□□ -1.39
ATG4DQ86TL0 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC6.38□□□□□ -1.39
ATG4DQ86TL0 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
ATG4DQ86TL0 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC6.38□□□□□ -1.39
ATG4DQ86TL0 DLG5-AS1-201ENST00000449852 487 ntTSL 2 BASIC6.38□□□□□ -1.39
ATG4DQ86TL0 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC6.38□□□□□ -1.39
ATG4DQ86TL0 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC6.38□□□□□ -1.39
ATG4DQ86TL0 ATP5A1P7-201ENST00000453978 1279 ntBASIC6.38□□□□□ -1.39
ATG4DQ86TL0 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC6.38□□□□□ -1.39
ATG4DQ86TL0 RPL35AP19-201ENST00000469425 329 ntBASIC6.38□□□□□ -1.39
ATG4DQ86TL0 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
ATG4DQ86TL0 RPL7P42-201ENST00000481005 679 ntBASIC6.38□□□□□ -1.39
ATG4DQ86TL0 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC6.38□□□□□ -1.39
ATG4DQ86TL0 AC095057.1-201ENST00000507583 168 ntBASIC6.38□□□□□ -1.39
ATG4DQ86TL0 NACAP6-201ENST00000509572 622 ntBASIC6.38□□□□□ -1.39
ATG4DQ86TL0 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC6.38□□□□□ -1.39
ATG4DQ86TL0 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC6.38□□□□□ -1.39
ATG4DQ86TL0 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC6.38□□□□□ -1.39
ATG4DQ86TL0 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC6.38□□□□□ -1.39
ATG4DQ86TL0 RNA5SP518-201ENST00000515957 119 ntBASIC6.38□□□□□ -1.39
ATG4DQ86TL0 EEF1B2P2-201ENST00000519625 676 ntBASIC6.38□□□□□ -1.39
ATG4DQ86TL0 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC6.38□□□□□ -1.39
ATG4DQ86TL0 AC022832.1-201ENST00000530718 645 ntBASIC6.38□□□□□ -1.39
ATG4DQ86TL0 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC6.38□□□□□ -1.39
ATG4DQ86TL0 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.38□□□□□ -1.39
ATG4DQ86TL0 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC6.38□□□□□ -1.39
ATG4DQ86TL0 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC6.38□□□□□ -1.39
ATG4DQ86TL0 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC6.38□□□□□ -1.39
ATG4DQ86TL0 LLPHP1-201ENST00000603571 367 ntBASIC6.38□□□□□ -1.39
ATG4DQ86TL0 WBP1LP12-201ENST00000604449 331 ntBASIC6.38□□□□□ -1.39
ATG4DQ86TL0 AP000860.1-201ENST00000605250 559 ntBASIC6.38□□□□□ -1.39
ATG4DQ86TL0 AC122710.3-201ENST00000606566 541 ntBASIC6.38□□□□□ -1.39
ATG4DQ86TL0 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC6.38□□□□□ -1.39
ATG4DQ86TL0 AC091304.9-201ENST00000612091 226 ntBASIC6.38□□□□□ -1.39
ATG4DQ86TL0 MIR6883-201ENST00000614952 78 ntBASIC6.38□□□□□ -1.39
ATG4DQ86TL0 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC6.38□□□□□ -1.39
ATG4DQ86TL0 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC6.38□□□□□ -1.39
ATG4DQ86TL0 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
ATG4DQ86TL0 EED-206ENST00000527888 1422 ntTSL 2 BASIC6.38□□□□□ -1.39
ATG4DQ86TL0 AL359715.4-201ENST00000606629 1436 ntBASIC6.38□□□□□ -1.39
ATG4DQ86TL0 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
ATG4DQ86TL0 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC6.38□□□□□ -1.39
ATG4DQ86TL0 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
ATG4DQ86TL0 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC6.38□□□□□ -1.39
ATG4DQ86TL0 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC6.38□□□□□ -1.39
ATG4DQ86TL0 AL359715.3-201ENST00000569267 2123 ntBASIC6.38□□□□□ -1.39
ATG4DQ86TL0 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
ATG4DQ86TL0 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
ATG4DQ86TL0 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.38□□□□□ -1.39
ATG4DQ86TL0 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
ATG4DQ86TL0 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
ATG4DQ86TL0 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC6.38□□□□□ -1.39
ATG4DQ86TL0 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
ATG4DQ86TL0 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
ATG4DQ86TL0 AC012213.2-201ENST00000562917 4597 ntBASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 166 ms