Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC8.66□□□□□ -1.02
RC3H1Q5TC82 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
RC3H1Q5TC82 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC8.66□□□□□ -1.02
RC3H1Q5TC82 AL139805.2-201ENST00000455305 2433 ntBASIC8.66□□□□□ -1.02
RC3H1Q5TC82 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC8.66□□□□□ -1.02
RC3H1Q5TC82 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC8.66□□□□□ -1.02
RC3H1Q5TC82 BRINP3-201ENST00000367462 3142 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
RC3H1Q5TC82 ZNF90P1-201ENST00000480493 1951 ntBASIC8.66□□□□□ -1.02
RC3H1Q5TC82 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
RC3H1Q5TC82 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC8.66□□□□□ -1.02
RC3H1Q5TC82 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
RC3H1Q5TC82 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
RC3H1Q5TC82 ASB8-201ENST00000317697 2615 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
RC3H1Q5TC82 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
RC3H1Q5TC82 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
RC3H1Q5TC82 CACNA1D-201ENST00000288139 9341 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
RC3H1Q5TC82 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
RC3H1Q5TC82 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
RC3H1Q5TC82 NTRK3-212ENST00000558676 4670 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
RC3H1Q5TC82 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC8.65□□□□□ -1.02
RC3H1Q5TC82 AC008676.2-202ENST00000509655 1992 ntTSL 2 BASIC8.65□□□□□ -1.02
RC3H1Q5TC82 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
RC3H1Q5TC82 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
RC3H1Q5TC82 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC8.65□□□□□ -1.02
RC3H1Q5TC82 TMSB4XP4-201ENST00000323496 618 ntBASIC8.65□□□□□ -1.02
RC3H1Q5TC82 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
RC3H1Q5TC82 Y_RNA.38-201ENST00000362617 102 ntBASIC8.65□□□□□ -1.02
RC3H1Q5TC82 RNA5SP485-201ENST00000365053 119 ntBASIC8.65□□□□□ -1.02
RC3H1Q5TC82 RNA5SP77-201ENST00000365394 120 ntBASIC8.65□□□□□ -1.02
RC3H1Q5TC82 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC8.65□□□□□ -1.02
RC3H1Q5TC82 RNU6-1005P-201ENST00000384519 107 ntBASIC8.65□□□□□ -1.02
RC3H1Q5TC82 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC8.65□□□□□ -1.02
RC3H1Q5TC82 AC068481.1-201ENST00000415520 530 ntTSL 4 BASIC8.65□□□□□ -1.02
RC3H1Q5TC82 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC8.65□□□□□ -1.02
RC3H1Q5TC82 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
RC3H1Q5TC82 AL513174.1-201ENST00000423182 629 ntBASIC8.65□□□□□ -1.02
RC3H1Q5TC82 BTF3P10-201ENST00000433415 495 ntBASIC8.65□□□□□ -1.02
RC3H1Q5TC82 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC8.65□□□□□ -1.02
RC3H1Q5TC82 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC8.65□□□□□ -1.02
RC3H1Q5TC82 DNAJC19P1-201ENST00000455312 319 ntBASIC8.65□□□□□ -1.02
RC3H1Q5TC82 OR11I1P-201ENST00000486033 954 ntBASIC8.65□□□□□ -1.02
RC3H1Q5TC82 AC023050.1-201ENST00000498198 304 ntBASIC8.65□□□□□ -1.02
RC3H1Q5TC82 PFN2-217ENST00000498307 556 ntTSL 4 BASIC8.65□□□□□ -1.02
RC3H1Q5TC82 RN7SL104P-201ENST00000498686 293 ntBASIC8.65□□□□□ -1.02
RC3H1Q5TC82 OR52H2P-201ENST00000514607 902 ntBASIC8.65□□□□□ -1.02
RC3H1Q5TC82 TBCA-203ENST00000517679 545 ntTSL 3 BASIC8.65□□□□□ -1.02
RC3H1Q5TC82 AC125612.1-201ENST00000547580 377 ntBASIC8.65□□□□□ -1.02
RC3H1Q5TC82 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC8.65□□□□□ -1.02
RC3H1Q5TC82 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC8.65□□□□□ -1.02
RC3H1Q5TC82 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC8.65□□□□□ -1.02
RC3H1Q5TC82 CFL2-206ENST00000556161 546 ntTSL 4 BASIC8.65□□□□□ -1.02
RC3H1Q5TC82 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC8.65□□□□□ -1.02
RC3H1Q5TC82 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC8.65□□□□□ -1.02
RC3H1Q5TC82 AC006441.3-201ENST00000580121 456 ntTSL 4 BASIC8.65□□□□□ -1.02
RC3H1Q5TC82 SYPL1P2-201ENST00000582878 727 ntBASIC8.65□□□□□ -1.02
RC3H1Q5TC82 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC8.65□□□□□ -1.02
RC3H1Q5TC82 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC8.65□□□□□ -1.02
RC3H1Q5TC82 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC8.65□□□□□ -1.02
RC3H1Q5TC82 UBE2V2P2-201ENST00000587677 504 ntBASIC8.65□□□□□ -1.02
RC3H1Q5TC82 APOC2-205ENST00000592257 444 ntTSL 3 BASIC8.65□□□□□ -1.02
RC3H1Q5TC82 AL589743.7-201ENST00000612637 233 ntBASIC8.65□□□□□ -1.02
RC3H1Q5TC82 AL353626.1-201ENST00000613429 507 ntTSL 5 BASIC8.65□□□□□ -1.02
RC3H1Q5TC82 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC8.65□□□□□ -1.02
RC3H1Q5TC82 AC114546.4-201ENST00000624413 369 ntBASIC8.65□□□□□ -1.02
RC3H1Q5TC82 AC073488.2-201ENST00000631903 751 ntBASIC8.65□□□□□ -1.02
RC3H1Q5TC82 MIR3688-2-201ENST00000636963 87 ntBASIC8.65□□□□□ -1.02
RC3H1Q5TC82 ZNRD1ASP-221ENST00000637794 1074 ntBASIC8.65□□□□□ -1.02
RC3H1Q5TC82 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
RC3H1Q5TC82 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
RC3H1Q5TC82 AC020658.2-201ENST00000559030 4020 ntBASIC8.65□□□□□ -1.03
RC3H1Q5TC82 LNPEP-201ENST00000231368 12752 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
RC3H1Q5TC82 AP000641.1-201ENST00000531988 1639 ntBASIC8.65□□□□□ -1.03
RC3H1Q5TC82 ERBB3-221ENST00000553131 3237 ntTSL 2 BASIC8.65□□□□□ -1.03
RC3H1Q5TC82 AC020978.6-201ENST00000571197 3177 ntBASIC8.65□□□□□ -1.03
RC3H1Q5TC82 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.03
RC3H1Q5TC82 CTAGE15-201ENST00000420911 2587 ntAPPRIS P1 BASIC8.65□□□□□ -1.03
RC3H1Q5TC82 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
RC3H1Q5TC82 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC8.64□□□□□ -1.03
RC3H1Q5TC82 AL353763.2-201ENST00000623489 1903 ntBASIC8.64□□□□□ -1.03
RC3H1Q5TC82 THAP12P6-201ENST00000431978 2310 ntBASIC8.64□□□□□ -1.03
RC3H1Q5TC82 WDR44-201ENST00000254029 4111 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
RC3H1Q5TC82 MTND4P27-201ENST00000450813 1354 ntBASIC8.64□□□□□ -1.03
RC3H1Q5TC82 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC8.64□□□□□ -1.03
RC3H1Q5TC82 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
RC3H1Q5TC82 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
RC3H1Q5TC82 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
RC3H1Q5TC82 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
RC3H1Q5TC82 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC8.64□□□□□ -1.03
RC3H1Q5TC82 UBAP2L-203ENST00000361546 3864 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
RC3H1Q5TC82 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
RC3H1Q5TC82 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
RC3H1Q5TC82 U3.52-201ENST00000384034 216 ntBASIC8.64□□□□□ -1.03
RC3H1Q5TC82 RNU6-876P-201ENST00000391295 104 ntBASIC8.64□□□□□ -1.03
RC3H1Q5TC82 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC8.64□□□□□ -1.03
RC3H1Q5TC82 CIR1P3-201ENST00000405137 479 ntBASIC8.64□□□□□ -1.03
RC3H1Q5TC82 TPMTP3-201ENST00000411928 735 ntBASIC8.64□□□□□ -1.03
RC3H1Q5TC82 ARAFP1-201ENST00000422172 605 ntBASIC8.64□□□□□ -1.03
RC3H1Q5TC82 AC245517.2-201ENST00000442890 346 ntBASIC8.64□□□□□ -1.03
RC3H1Q5TC82 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC8.64□□□□□ -1.03
RC3H1Q5TC82 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC8.64□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms