Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
LDLRAP1Q5SW96 GAPDHP42-201ENST00000406848 981 ntBASIC5.6□□□□□ -1.51
LDLRAP1Q5SW96 BMS1P17-202ENST00000416720 316 ntBASIC5.6□□□□□ -1.51
LDLRAP1Q5SW96 AL662874.1-201ENST00000426065 230 ntBASIC5.6□□□□□ -1.51
LDLRAP1Q5SW96 AC104843.2-201ENST00000427666 297 ntBASIC5.6□□□□□ -1.51
LDLRAP1Q5SW96 TMEM183AP1-205ENST00000432739 290 ntBASIC5.6□□□□□ -1.51
LDLRAP1Q5SW96 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LDLRAP1Q5SW96 AC002504.1-201ENST00000438281 691 ntBASIC5.6□□□□□ -1.51
LDLRAP1Q5SW96 SUMO2P3-201ENST00000438311 288 ntBASIC5.6□□□□□ -1.51
LDLRAP1Q5SW96 RPL36AP39-201ENST00000445859 318 ntBASIC5.6□□□□□ -1.51
LDLRAP1Q5SW96 AL161722.1-201ENST00000446972 1032 ntBASIC5.6□□□□□ -1.51
LDLRAP1Q5SW96 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LDLRAP1Q5SW96 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
LDLRAP1Q5SW96 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.6□□□□□ -1.51
LDLRAP1Q5SW96 SUMO2P4-201ENST00000504193 276 ntBASIC5.6□□□□□ -1.51
LDLRAP1Q5SW96 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.6□□□□□ -1.51
LDLRAP1Q5SW96 MTATP6P1-201ENST00000514057 681 ntBASIC5.6□□□□□ -1.51
LDLRAP1Q5SW96 TMEM97P2-201ENST00000517841 403 ntBASIC5.6□□□□□ -1.51
LDLRAP1Q5SW96 AC130364.2-201ENST00000528639 604 ntBASIC5.6□□□□□ -1.51
LDLRAP1Q5SW96 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
LDLRAP1Q5SW96 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.6□□□□□ -1.51
LDLRAP1Q5SW96 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.6□□□□□ -1.51
LDLRAP1Q5SW96 HSPE1P2-201ENST00000554777 306 ntBASIC5.6□□□□□ -1.51
LDLRAP1Q5SW96 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.6□□□□□ -1.51
LDLRAP1Q5SW96 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.6□□□□□ -1.51
LDLRAP1Q5SW96 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.6□□□□□ -1.51
LDLRAP1Q5SW96 AC026124.2-201ENST00000621847 656 ntBASIC5.6□□□□□ -1.51
LDLRAP1Q5SW96 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
LDLRAP1Q5SW96 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.6□□□□□ -1.51
LDLRAP1Q5SW96 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.6□□□□□ -1.51
LDLRAP1Q5SW96 MRE11P1-201ENST00000464884 2127 ntBASIC5.6□□□□□ -1.51
LDLRAP1Q5SW96 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.6□□□□□ -1.51
LDLRAP1Q5SW96 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
LDLRAP1Q5SW96 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
LDLRAP1Q5SW96 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LDLRAP1Q5SW96 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
LDLRAP1Q5SW96 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LDLRAP1Q5SW96 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.51
LDLRAP1Q5SW96 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
LDLRAP1Q5SW96 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
LDLRAP1Q5SW96 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LDLRAP1Q5SW96 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
LDLRAP1Q5SW96 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LDLRAP1Q5SW96 SRRM1P3-201ENST00000426911 2678 ntBASIC5.59□□□□□ -1.51
LDLRAP1Q5SW96 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LDLRAP1Q5SW96 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LDLRAP1Q5SW96 RNA5SP122-201ENST00000384457 108 ntBASIC5.59□□□□□ -1.51
LDLRAP1Q5SW96 SNORA17A-201ENST00000391185 133 ntBASIC5.59□□□□□ -1.51
LDLRAP1Q5SW96 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
LDLRAP1Q5SW96 RNA5SP178-201ENST00000410380 128 ntBASIC5.59□□□□□ -1.51
LDLRAP1Q5SW96 RN7SKP286-201ENST00000410894 299 ntBASIC5.59□□□□□ -1.51
LDLRAP1Q5SW96 AL356968.2-201ENST00000412769 1257 ntBASIC5.59□□□□□ -1.51
LDLRAP1Q5SW96 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.59□□□□□ -1.51
LDLRAP1Q5SW96 AL034379.1-201ENST00000423216 253 ntBASIC5.59□□□□□ -1.51
LDLRAP1Q5SW96 VTI1BP4-201ENST00000427516 527 ntBASIC5.59□□□□□ -1.51
LDLRAP1Q5SW96 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.59□□□□□ -1.51
LDLRAP1Q5SW96 AC242426.1-201ENST00000435270 960 ntBASIC5.59□□□□□ -1.51
LDLRAP1Q5SW96 MTND2P40-201ENST00000436718 841 ntBASIC5.59□□□□□ -1.51
LDLRAP1Q5SW96 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.59□□□□□ -1.51
LDLRAP1Q5SW96 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.59□□□□□ -1.51
LDLRAP1Q5SW96 AC090602.1-201ENST00000469695 252 ntBASIC5.59□□□□□ -1.51
LDLRAP1Q5SW96 ATP5LP5-201ENST00000483050 299 ntBASIC5.59□□□□□ -1.51
LDLRAP1Q5SW96 DUTP7-201ENST00000507982 486 ntBASIC5.59□□□□□ -1.51
LDLRAP1Q5SW96 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LDLRAP1Q5SW96 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.59□□□□□ -1.51
LDLRAP1Q5SW96 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.59□□□□□ -1.51
LDLRAP1Q5SW96 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.59□□□□□ -1.51
LDLRAP1Q5SW96 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LDLRAP1Q5SW96 PMS2P3-207ENST00000529061 717 ntBASIC5.59□□□□□ -1.51
LDLRAP1Q5SW96 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.59□□□□□ -1.51
LDLRAP1Q5SW96 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.59□□□□□ -1.51
LDLRAP1Q5SW96 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.59□□□□□ -1.51
LDLRAP1Q5SW96 AL049872.1-201ENST00000556323 322 ntBASIC5.59□□□□□ -1.51
LDLRAP1Q5SW96 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.59□□□□□ -1.51
LDLRAP1Q5SW96 AC019322.1-201ENST00000571869 389 ntBASIC5.59□□□□□ -1.51
LDLRAP1Q5SW96 AP005901.4-201ENST00000577336 569 ntBASIC5.59□□□□□ -1.51
LDLRAP1Q5SW96 DHFRP1-201ENST00000579682 559 ntBASIC5.59□□□□□ -1.51
LDLRAP1Q5SW96 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.59□□□□□ -1.51
LDLRAP1Q5SW96 AC126175.1-201ENST00000617041 758 ntBASIC5.59□□□□□ -1.51
LDLRAP1Q5SW96 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.59□□□□□ -1.51
LDLRAP1Q5SW96 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.59□□□□□ -1.51
LDLRAP1Q5SW96 AC007683.2-201ENST00000624681 714 ntBASIC5.59□□□□□ -1.51
LDLRAP1Q5SW96 SNORA17.5-201ENST00000630429 132 ntBASIC5.59□□□□□ -1.51
LDLRAP1Q5SW96 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
LDLRAP1Q5SW96 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LDLRAP1Q5SW96 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
LDLRAP1Q5SW96 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
LDLRAP1Q5SW96 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
LDLRAP1Q5SW96 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
LDLRAP1Q5SW96 YES1P1-201ENST00000418510 1628 ntBASIC5.59□□□□□ -1.52
LDLRAP1Q5SW96 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.52
LDLRAP1Q5SW96 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
LDLRAP1Q5SW96 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.59□□□□□ -1.52
LDLRAP1Q5SW96 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.58□□□□□ -1.52
LDLRAP1Q5SW96 PROS2P-201ENST00000474651 1951 ntBASIC5.58□□□□□ -1.52
LDLRAP1Q5SW96 PWAR1-201ENST00000624188 2414 ntBASIC5.58□□□□□ -1.52
LDLRAP1Q5SW96 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LDLRAP1Q5SW96 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LDLRAP1Q5SW96 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
LDLRAP1Q5SW96 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms