Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 CYP4F35P-202ENST00000636121 390 ntBASIC6.46□□□□□ -1.38
SHROOM1Q2M3G4 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.46□□□□□ -1.38
SHROOM1Q2M3G4 LINC01963-201ENST00000562038 3148 ntBASIC6.46□□□□□ -1.38
SHROOM1Q2M3G4 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SHROOM1Q2M3G4 AC007342.5-201ENST00000571340 2142 ntBASIC6.46□□□□□ -1.38
SHROOM1Q2M3G4 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SHROOM1Q2M3G4 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SHROOM1Q2M3G4 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
SHROOM1Q2M3G4 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SHROOM1Q2M3G4 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SHROOM1Q2M3G4 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SHROOM1Q2M3G4 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
SHROOM1Q2M3G4 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SHROOM1Q2M3G4 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SHROOM1Q2M3G4 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.45□□□□□ -1.38
SHROOM1Q2M3G4 SNORD1C-201ENST00000363315 78 ntBASIC6.45□□□□□ -1.38
SHROOM1Q2M3G4 RNA5SP507-201ENST00000363603 121 ntBASIC6.45□□□□□ -1.38
SHROOM1Q2M3G4 AC092651.1-201ENST00000426110 312 ntBASIC6.45□□□□□ -1.38
SHROOM1Q2M3G4 AC006455.6-201ENST00000426192 893 ntBASIC6.45□□□□□ -1.38
SHROOM1Q2M3G4 DSTNP5-201ENST00000427921 523 ntBASIC6.45□□□□□ -1.38
SHROOM1Q2M3G4 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SHROOM1Q2M3G4 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC6.45□□□□□ -1.38
SHROOM1Q2M3G4 RPL35AP28-201ENST00000459730 331 ntBASIC6.45□□□□□ -1.38
SHROOM1Q2M3G4 RPSAP50-201ENST00000481955 852 ntBASIC6.45□□□□□ -1.38
SHROOM1Q2M3G4 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC6.45□□□□□ -1.38
SHROOM1Q2M3G4 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.45□□□□□ -1.38
SHROOM1Q2M3G4 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC6.45□□□□□ -1.38
SHROOM1Q2M3G4 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC6.45□□□□□ -1.38
SHROOM1Q2M3G4 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC6.45□□□□□ -1.38
SHROOM1Q2M3G4 AC244517.3-201ENST00000616254 1235 ntBASIC6.45□□□□□ -1.38
SHROOM1Q2M3G4 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.45□□□□□ -1.38
SHROOM1Q2M3G4 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.45□□□□□ -1.38
SHROOM1Q2M3G4 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SHROOM1Q2M3G4 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.45□□□□□ -1.38
SHROOM1Q2M3G4 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SHROOM1Q2M3G4 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SHROOM1Q2M3G4 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SHROOM1Q2M3G4 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
SHROOM1Q2M3G4 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
SHROOM1Q2M3G4 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC6.45□□□□□ -1.38
SHROOM1Q2M3G4 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
SHROOM1Q2M3G4 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SHROOM1Q2M3G4 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
SHROOM1Q2M3G4 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.44□□□□□ -1.38
SHROOM1Q2M3G4 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SHROOM1Q2M3G4 AC073429.2-201ENST00000569694 1444 ntBASIC6.44□□□□□ -1.38
SHROOM1Q2M3G4 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.44□□□□□ -1.38
SHROOM1Q2M3G4 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
SHROOM1Q2M3G4 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.44□□□□□ -1.38
SHROOM1Q2M3G4 AC005294.1-201ENST00000355509 281 ntBASIC6.44□□□□□ -1.38
SHROOM1Q2M3G4 RNU1-43P-201ENST00000365052 165 ntBASIC6.44□□□□□ -1.38
SHROOM1Q2M3G4 DUTP5-201ENST00000406790 469 ntBASIC6.44□□□□□ -1.38
SHROOM1Q2M3G4 MGAT2P2-201ENST00000427194 797 ntBASIC6.44□□□□□ -1.38
SHROOM1Q2M3G4 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.44□□□□□ -1.38
SHROOM1Q2M3G4 RN7SL329P-201ENST00000467740 299 ntBASIC6.44□□□□□ -1.38
SHROOM1Q2M3G4 RPL7P39-201ENST00000481157 744 ntBASIC6.44□□□□□ -1.38
SHROOM1Q2M3G4 AC015864.1-201ENST00000496512 544 ntBASIC6.44□□□□□ -1.38
SHROOM1Q2M3G4 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.44□□□□□ -1.38
SHROOM1Q2M3G4 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC6.44□□□□□ -1.38
SHROOM1Q2M3G4 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC6.44□□□□□ -1.38
SHROOM1Q2M3G4 RNU6ATAC24P-201ENST00000516811 135 ntBASIC6.44□□□□□ -1.38
SHROOM1Q2M3G4 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC6.44□□□□□ -1.38
SHROOM1Q2M3G4 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.44□□□□□ -1.38
SHROOM1Q2M3G4 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.44□□□□□ -1.38
SHROOM1Q2M3G4 AP004607.2-201ENST00000533949 322 ntBASIC6.44□□□□□ -1.38
SHROOM1Q2M3G4 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
SHROOM1Q2M3G4 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
SHROOM1Q2M3G4 AC016839.1-201ENST00000578162 867 ntBASIC6.44□□□□□ -1.38
SHROOM1Q2M3G4 RN7SL708P-201ENST00000580952 299 ntBASIC6.44□□□□□ -1.38
SHROOM1Q2M3G4 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.44□□□□□ -1.38
SHROOM1Q2M3G4 AC133644.2-201ENST00000608142 540 ntBASIC6.44□□□□□ -1.38
SHROOM1Q2M3G4 AC037198.3-201ENST00000616754 526 ntBASIC6.44□□□□□ -1.38
SHROOM1Q2M3G4 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC6.44□□□□□ -1.38
SHROOM1Q2M3G4 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC6.44□□□□□ -1.38
SHROOM1Q2M3G4 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SHROOM1Q2M3G4 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.44□□□□□ -1.38
SHROOM1Q2M3G4 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
SHROOM1Q2M3G4 MT-RNR2-201ENST00000387347 1559 ntBASIC6.44□□□□□ -1.38
SHROOM1Q2M3G4 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.43□□□□□ -1.38
SHROOM1Q2M3G4 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.43□□□□□ -1.38
SHROOM1Q2M3G4 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
SHROOM1Q2M3G4 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.43□□□□□ -1.38
SHROOM1Q2M3G4 AL034546.1-201ENST00000623740 3693 ntBASIC6.43□□□□□ -1.38
SHROOM1Q2M3G4 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SHROOM1Q2M3G4 MIR551A-201ENST00000385042 96 ntBASIC6.43□□□□□ -1.38
SHROOM1Q2M3G4 MIR765-201ENST00000390226 114 ntBASIC6.43□□□□□ -1.38
SHROOM1Q2M3G4 VN1R21P-201ENST00000426703 765 ntBASIC6.43□□□□□ -1.38
SHROOM1Q2M3G4 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC6.43□□□□□ -1.38
SHROOM1Q2M3G4 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC6.43□□□□□ -1.38
SHROOM1Q2M3G4 NANOGP9-201ENST00000439890 892 ntBASIC6.43□□□□□ -1.38
SHROOM1Q2M3G4 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC6.43□□□□□ -1.38
SHROOM1Q2M3G4 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.43□□□□□ -1.38
SHROOM1Q2M3G4 MEMO1P4-201ENST00000453590 386 ntBASIC6.43□□□□□ -1.38
SHROOM1Q2M3G4 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.43□□□□□ -1.38
SHROOM1Q2M3G4 RPL7AP6-201ENST00000477943 801 ntBASIC6.43□□□□□ -1.38
SHROOM1Q2M3G4 AC135999.1-201ENST00000478962 479 ntBASIC6.43□□□□□ -1.38
SHROOM1Q2M3G4 FTH1P8-201ENST00000498161 514 ntBASIC6.43□□□□□ -1.38
SHROOM1Q2M3G4 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC6.43□□□□□ -1.38
SHROOM1Q2M3G4 RNA5SP373-201ENST00000517271 95 ntBASIC6.43□□□□□ -1.38
SHROOM1Q2M3G4 HMGN2P6-201ENST00000551091 273 ntBASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 162 ms