Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 AC067959.1-201ENST00000604334 379 ntBASIC7.16□□□□□ -1.26
COL16A1Q07092 AC005962.2-201ENST00000611427 652 ntBASIC7.16□□□□□ -1.26
COL16A1Q07092 MVP-219ENST00000629059 120 ntTSL 5 BASIC7.16□□□□□ -1.26
COL16A1Q07092 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL16A1Q07092 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL16A1Q07092 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC7.16□□□□□ -1.26
COL16A1Q07092 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
COL16A1Q07092 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
COL16A1Q07092 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL16A1Q07092 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
COL16A1Q07092 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL16A1Q07092 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL16A1Q07092 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC7.16□□□□□ -1.26
COL16A1Q07092 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL16A1Q07092 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
COL16A1Q07092 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL16A1Q07092 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL16A1Q07092 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL16A1Q07092 AC114774.1-201ENST00000507410 1770 ntBASIC7.16□□□□□ -1.26
COL16A1Q07092 LIG3-202ENST00000378526 8400 ntAPPRIS P4 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL16A1Q07092 PCBP1-AS1-230ENST00000439670 2180 ntTSL 2 BASIC7.16□□□□□ -1.26
COL16A1Q07092 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL16A1Q07092 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
COL16A1Q07092 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL16A1Q07092 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC7.16□□□□□ -1.26
COL16A1Q07092 AC092070.2-203ENST00000598377 3644 ntBASIC7.16□□□□□ -1.26
COL16A1Q07092 AL121886.1-201ENST00000358609 435 ntBASIC7.16□□□□□ -1.26
COL16A1Q07092 RNA5-8SP7-201ENST00000363443 155 ntBASIC7.16□□□□□ -1.26
COL16A1Q07092 RPL12P17-201ENST00000432393 498 ntBASIC7.16□□□□□ -1.26
COL16A1Q07092 AC025674.1-201ENST00000507074 324 ntBASIC7.16□□□□□ -1.26
COL16A1Q07092 AC109464.1-201ENST00000511091 819 ntBASIC7.16□□□□□ -1.26
COL16A1Q07092 TOMM22P4-201ENST00000511318 336 ntBASIC7.16□□□□□ -1.26
COL16A1Q07092 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC7.16□□□□□ -1.26
COL16A1Q07092 AC098935.2-201ENST00000604222 466 ntBASIC7.16□□□□□ -1.26
COL16A1Q07092 AL161637.1-201ENST00000622380 412 ntBASIC7.16□□□□□ -1.26
COL16A1Q07092 MTCO1P1-201ENST00000624263 1081 ntBASIC7.16□□□□□ -1.26
COL16A1Q07092 ATXN3-216ENST00000545170 6950 ntTSL 5 BASIC7.16□□□□□ -1.26
COL16A1Q07092 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
COL16A1Q07092 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
COL16A1Q07092 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
COL16A1Q07092 CNR1-202ENST00000369499 5549 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
COL16A1Q07092 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC7.15□□□□□ -1.26
COL16A1Q07092 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
COL16A1Q07092 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
COL16A1Q07092 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC7.15□□□□□ -1.26
COL16A1Q07092 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
COL16A1Q07092 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
COL16A1Q07092 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
COL16A1Q07092 RNA5SP191-201ENST00000362585 102 ntBASIC7.15□□□□□ -1.27
COL16A1Q07092 AL591848.1-201ENST00000413092 322 ntBASIC7.15□□□□□ -1.27
COL16A1Q07092 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC7.15□□□□□ -1.27
COL16A1Q07092 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC7.15□□□□□ -1.27
COL16A1Q07092 TXNP5-201ENST00000441043 315 ntBASIC7.15□□□□□ -1.27
COL16A1Q07092 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC7.15□□□□□ -1.27
COL16A1Q07092 AC092754.1-201ENST00000472975 479 ntBASIC7.15□□□□□ -1.27
COL16A1Q07092 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
COL16A1Q07092 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC7.15□□□□□ -1.27
COL16A1Q07092 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC7.15□□□□□ -1.27
COL16A1Q07092 RGS5-219ENST00000528019 512 ntTSL 4 BASIC7.15□□□□□ -1.27
COL16A1Q07092 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC7.15□□□□□ -1.27
COL16A1Q07092 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC7.15□□□□□ -1.27
COL16A1Q07092 SECISBP2L-201ENST00000261847 6779 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.27
COL16A1Q07092 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.27
COL16A1Q07092 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC7.15□□□□□ -1.27
COL16A1Q07092 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC7.15□□□□□ -1.27
COL16A1Q07092 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL16A1Q07092 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC7.14□□□□□ -1.27
COL16A1Q07092 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC7.14□□□□□ -1.27
COL16A1Q07092 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC7.14□□□□□ -1.27
COL16A1Q07092 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL16A1Q07092 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
COL16A1Q07092 MIR600-201ENST00000385007 98 ntBASIC7.14□□□□□ -1.27
COL16A1Q07092 SNORA11C-201ENST00000408532 129 ntBASIC7.14□□□□□ -1.27
COL16A1Q07092 RN7SKP263-201ENST00000411194 309 ntBASIC7.14□□□□□ -1.27
COL16A1Q07092 TRGV7-201ENST00000427089 353 ntBASIC7.14□□□□□ -1.27
COL16A1Q07092 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC7.14□□□□□ -1.27
COL16A1Q07092 AC011742.2-201ENST00000443818 352 ntBASIC7.14□□□□□ -1.27
COL16A1Q07092 TXNP2-201ENST00000443918 295 ntBASIC7.14□□□□□ -1.27
COL16A1Q07092 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC7.14□□□□□ -1.27
COL16A1Q07092 OSTCP1-201ENST00000455507 450 ntBASIC7.14□□□□□ -1.27
COL16A1Q07092 AC013356.1-201ENST00000489027 564 ntBASIC7.14□□□□□ -1.27
COL16A1Q07092 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC7.14□□□□□ -1.27
COL16A1Q07092 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
COL16A1Q07092 OR5AM1P-201ENST00000532136 1032 ntBASIC7.14□□□□□ -1.27
COL16A1Q07092 PDCD6IPP2-207ENST00000566321 1069 ntBASIC7.14□□□□□ -1.27
COL16A1Q07092 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC7.14□□□□□ -1.27
COL16A1Q07092 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC7.14□□□□□ -1.27
COL16A1Q07092 AC020765.1-201ENST00000604296 328 ntBASIC7.14□□□□□ -1.27
COL16A1Q07092 SSX9-202ENST00000608568 580 ntTSL 4 BASIC7.14□□□□□ -1.27
COL16A1Q07092 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
COL16A1Q07092 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
COL16A1Q07092 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC7.14□□□□□ -1.27
COL16A1Q07092 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL16A1Q07092 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL16A1Q07092 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC7.14□□□□□ -1.27
COL16A1Q07092 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL16A1Q07092 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL16A1Q07092 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
COL16A1Q07092 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
COL16A1Q07092 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms