Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.4□□□□□ -1.38
GABPAQ06546 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
GABPAQ06546 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
GABPAQ06546 AP004289.1-201ENST00000436307 2205 ntBASIC6.4□□□□□ -1.38
GABPAQ06546 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
GABPAQ06546 SNORA67-201ENST00000384423 137 ntBASIC6.4□□□□□ -1.38
GABPAQ06546 SNORA70-201ENST00000384436 135 ntBASIC6.4□□□□□ -1.38
GABPAQ06546 RNA5SP487-201ENST00000410186 122 ntBASIC6.4□□□□□ -1.38
GABPAQ06546 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.4□□□□□ -1.38
GABPAQ06546 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC6.4□□□□□ -1.38
GABPAQ06546 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.4□□□□□ -1.38
GABPAQ06546 RPL7P56-201ENST00000429441 717 ntBASIC6.4□□□□□ -1.38
GABPAQ06546 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.4□□□□□ -1.38
GABPAQ06546 FAM96AP1-201ENST00000430879 482 ntBASIC6.4□□□□□ -1.38
GABPAQ06546 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC6.4□□□□□ -1.38
GABPAQ06546 AC090142.2-201ENST00000483263 416 ntBASIC6.4□□□□□ -1.38
GABPAQ06546 AC093270.2-201ENST00000486157 792 ntBASIC6.4□□□□□ -1.38
GABPAQ06546 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC6.4□□□□□ -1.38
GABPAQ06546 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC6.4□□□□□ -1.38
GABPAQ06546 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.4□□□□□ -1.38
GABPAQ06546 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC6.4□□□□□ -1.38
GABPAQ06546 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC6.4□□□□□ -1.38
GABPAQ06546 AC106730.2-201ENST00000566641 540 ntBASIC6.4□□□□□ -1.38
GABPAQ06546 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC6.4□□□□□ -1.38
GABPAQ06546 AP000769.2-201ENST00000602344 396 ntBASIC6.4□□□□□ -1.38
GABPAQ06546 IGLCOR22-2-201ENST00000605398 313 ntBASIC6.4□□□□□ -1.38
GABPAQ06546 AL445222.1-201ENST00000607259 628 ntBASIC6.4□□□□□ -1.38
GABPAQ06546 WWOX-217ENST00000620008 450 ntTSL 2 BASIC6.4□□□□□ -1.38
GABPAQ06546 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.4□□□□□ -1.38
GABPAQ06546 KYNUP3-201ENST00000574386 1341 ntBASIC6.4□□□□□ -1.39
GABPAQ06546 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
GABPAQ06546 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
GABPAQ06546 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
GABPAQ06546 AC144833.1-201ENST00000567953 4089 ntBASIC6.4□□□□□ -1.39
GABPAQ06546 AC011493.1-201ENST00000596753 1632 ntBASIC6.39□□□□□ -1.39
GABPAQ06546 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
GABPAQ06546 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
GABPAQ06546 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
GABPAQ06546 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.39□□□□□ -1.39
GABPAQ06546 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.39□□□□□ -1.39
GABPAQ06546 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
GABPAQ06546 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.39□□□□□ -1.39
GABPAQ06546 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
GABPAQ06546 AL645927.1-201ENST00000396783 406 ntBASIC6.39□□□□□ -1.39
GABPAQ06546 DBIP1-201ENST00000401435 260 ntBASIC6.39□□□□□ -1.39
GABPAQ06546 RPL23AP27-201ENST00000415161 451 ntBASIC6.39□□□□□ -1.39
GABPAQ06546 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC6.39□□□□□ -1.39
GABPAQ06546 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC6.39□□□□□ -1.39
GABPAQ06546 AC093655.2-201ENST00000425735 631 ntBASIC6.39□□□□□ -1.39
GABPAQ06546 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC6.39□□□□□ -1.39
GABPAQ06546 AURKAPS1-201ENST00000451805 1212 ntBASIC6.39□□□□□ -1.39
GABPAQ06546 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.39□□□□□ -1.39
GABPAQ06546 AL389915.2-201ENST00000454576 441 ntBASIC6.39□□□□□ -1.39
GABPAQ06546 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC6.39□□□□□ -1.39
GABPAQ06546 OR4A6P-201ENST00000534364 970 ntBASIC6.39□□□□□ -1.39
GABPAQ06546 OR11H3P-201ENST00000554547 982 ntBASIC6.39□□□□□ -1.39
GABPAQ06546 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
GABPAQ06546 AC127381.1-201ENST00000555979 939 ntBASIC6.39□□□□□ -1.39
GABPAQ06546 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.39□□□□□ -1.39
GABPAQ06546 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC6.39□□□□□ -1.39
GABPAQ06546 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC6.39□□□□□ -1.39
GABPAQ06546 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC6.39□□□□□ -1.39
GABPAQ06546 AC135068.5-201ENST00000624197 983 ntBASIC6.39□□□□□ -1.39
GABPAQ06546 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
GABPAQ06546 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
GABPAQ06546 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
GABPAQ06546 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
GABPAQ06546 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
GABPAQ06546 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
GABPAQ06546 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.39□□□□□ -1.39
GABPAQ06546 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
GABPAQ06546 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
GABPAQ06546 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
GABPAQ06546 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.38□□□□□ -1.39
GABPAQ06546 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
GABPAQ06546 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
GABPAQ06546 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
GABPAQ06546 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
GABPAQ06546 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
GABPAQ06546 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
GABPAQ06546 RNU1-106P-201ENST00000384382 164 ntBASIC6.38□□□□□ -1.39
GABPAQ06546 MIR765-201ENST00000390226 114 ntBASIC6.38□□□□□ -1.39
GABPAQ06546 RNU1-149P-201ENST00000390870 161 ntBASIC6.38□□□□□ -1.39
GABPAQ06546 AL590399.2-201ENST00000427536 309 ntBASIC6.38□□□□□ -1.39
GABPAQ06546 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC6.38□□□□□ -1.39
GABPAQ06546 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC6.38□□□□□ -1.39
GABPAQ06546 H3F3BP1-201ENST00000440551 403 ntBASIC6.38□□□□□ -1.39
GABPAQ06546 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.38□□□□□ -1.39
GABPAQ06546 AL451063.1-201ENST00000450164 1133 ntBASIC6.38□□□□□ -1.39
GABPAQ06546 SBDSP1-204ENST00000453858 737 ntBASIC6.38□□□□□ -1.39
GABPAQ06546 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC6.38□□□□□ -1.39
GABPAQ06546 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC6.38□□□□□ -1.39
GABPAQ06546 RN7SL808P-201ENST00000496066 299 ntBASIC6.38□□□□□ -1.39
GABPAQ06546 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC6.38□□□□□ -1.39
GABPAQ06546 SNRPCP2-201ENST00000504370 475 ntBASIC6.38□□□□□ -1.39
GABPAQ06546 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC6.38□□□□□ -1.39
GABPAQ06546 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC6.38□□□□□ -1.39
GABPAQ06546 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
GABPAQ06546 AC109464.1-201ENST00000511091 819 ntBASIC6.38□□□□□ -1.39
GABPAQ06546 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms