Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 CBX1P5-201ENST00000475330 559 ntBASIC5.62□□□□□ -1.51
CBX1P83916 RPL34P33-201ENST00000486062 334 ntBASIC5.62□□□□□ -1.51
CBX1P83916 SUMO2P4-201ENST00000504193 276 ntBASIC5.62□□□□□ -1.51
CBX1P83916 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
CBX1P83916 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC5.62□□□□□ -1.51
CBX1P83916 AC093325.1-201ENST00000508378 326 ntBASIC5.62□□□□□ -1.51
CBX1P83916 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.62□□□□□ -1.51
CBX1P83916 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.62□□□□□ -1.51
CBX1P83916 OSTC-204ENST00000512478 663 ntTSL 5 BASIC5.62□□□□□ -1.51
CBX1P83916 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC5.62□□□□□ -1.51
CBX1P83916 IGLVVII-41-1-201ENST00000518405 151 ntBASIC5.62□□□□□ -1.51
CBX1P83916 AC105031.1-201ENST00000518550 476 ntBASIC5.62□□□□□ -1.51
CBX1P83916 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.62□□□□□ -1.51
CBX1P83916 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
CBX1P83916 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC5.62□□□□□ -1.51
CBX1P83916 PMS2P3-207ENST00000529061 717 ntBASIC5.62□□□□□ -1.51
CBX1P83916 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CBX1P83916 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.62□□□□□ -1.51
CBX1P83916 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.62□□□□□ -1.51
CBX1P83916 OR8G3P-201ENST00000533406 921 ntBASIC5.62□□□□□ -1.51
CBX1P83916 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.62□□□□□ -1.51
CBX1P83916 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CBX1P83916 LINC00556-201ENST00000569603 412 ntBASIC5.62□□□□□ -1.51
CBX1P83916 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC5.62□□□□□ -1.51
CBX1P83916 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CBX1P83916 MIR6839-201ENST00000620425 113 ntBASIC5.62□□□□□ -1.51
CBX1P83916 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
CBX1P83916 CR383656.5-201ENST00000547616 1340 ntBASIC5.62□□□□□ -1.51
CBX1P83916 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC5.62□□□□□ -1.51
CBX1P83916 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CBX1P83916 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CBX1P83916 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.62□□□□□ -1.51
CBX1P83916 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.62□□□□□ -1.51
CBX1P83916 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CBX1P83916 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CBX1P83916 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.62□□□□□ -1.51
CBX1P83916 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CBX1P83916 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CBX1P83916 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.62□□□□□ -1.51
CBX1P83916 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
CBX1P83916 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CBX1P83916 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CBX1P83916 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
CBX1P83916 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
CBX1P83916 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.61□□□□□ -1.51
CBX1P83916 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CBX1P83916 AL133268.1-201ENST00000405676 1401 ntBASIC5.61□□□□□ -1.51
CBX1P83916 RN7SKP205-201ENST00000410999 307 ntBASIC5.61□□□□□ -1.51
CBX1P83916 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CBX1P83916 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.61□□□□□ -1.51
CBX1P83916 RPL12P12-201ENST00000424633 501 ntBASIC5.61□□□□□ -1.51
CBX1P83916 AC090018.1-201ENST00000434369 367 ntBASIC5.61□□□□□ -1.51
CBX1P83916 TMX2P1-201ENST00000436507 708 ntBASIC5.61□□□□□ -1.51
CBX1P83916 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC5.61□□□□□ -1.51
CBX1P83916 AC104849.1-201ENST00000462623 405 ntBASIC5.61□□□□□ -1.51
CBX1P83916 RPL7AP28-201ENST00000464513 571 ntBASIC5.61□□□□□ -1.51
CBX1P83916 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.61□□□□□ -1.51
CBX1P83916 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.61□□□□□ -1.51
CBX1P83916 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.61□□□□□ -1.51
CBX1P83916 AC021146.3-201ENST00000511911 260 ntBASIC5.61□□□□□ -1.51
CBX1P83916 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC5.61□□□□□ -1.51
CBX1P83916 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC5.61□□□□□ -1.51
CBX1P83916 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.61□□□□□ -1.51
CBX1P83916 EIF4EP5-201ENST00000528228 640 ntBASIC5.61□□□□□ -1.51
CBX1P83916 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.61□□□□□ -1.51
CBX1P83916 AC008055.1-201ENST00000547032 609 ntBASIC5.61□□□□□ -1.51
CBX1P83916 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC5.61□□□□□ -1.51
CBX1P83916 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CBX1P83916 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.61□□□□□ -1.51
CBX1P83916 AC010547.7-201ENST00000570323 333 ntBASIC5.61□□□□□ -1.51
CBX1P83916 AC068408.1-201ENST00000577406 1144 ntBASIC5.61□□□□□ -1.51
CBX1P83916 AL591222.2-201ENST00000604443 754 ntBASIC5.61□□□□□ -1.51
CBX1P83916 RNU6-84P-201ENST00000607737 102 ntBASIC5.61□□□□□ -1.51
CBX1P83916 AL929601.4-201ENST00000613011 1341 ntBASIC5.61□□□□□ -1.51
CBX1P83916 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.61□□□□□ -1.51
CBX1P83916 AL357562.1-201ENST00000624911 609 ntBASIC5.61□□□□□ -1.51
CBX1P83916 AC129915.3-201ENST00000634128 948 ntBASIC5.61□□□□□ -1.51
CBX1P83916 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CBX1P83916 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
CBX1P83916 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.61□□□□□ -1.51
CBX1P83916 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CBX1P83916 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CBX1P83916 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
CBX1P83916 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
CBX1P83916 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CBX1P83916 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.6□□□□□ -1.51
CBX1P83916 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.6□□□□□ -1.51
CBX1P83916 MTCO1P22-201ENST00000604619 1360 ntBASIC5.6□□□□□ -1.51
CBX1P83916 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CBX1P83916 AC108751.5-201ENST00000492880 1336 ntBASIC5.6□□□□□ -1.51
CBX1P83916 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CBX1P83916 MTHFD2P5-201ENST00000320415 844 ntBASIC5.6□□□□□ -1.51
CBX1P83916 IL6STP1-201ENST00000346911 1020 ntBASIC5.6□□□□□ -1.51
CBX1P83916 MIR27A-201ENST00000385073 78 ntBASIC5.6□□□□□ -1.51
CBX1P83916 RNA5SP156-201ENST00000410250 110 ntBASIC5.6□□□□□ -1.51
CBX1P83916 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.6□□□□□ -1.51
CBX1P83916 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
CBX1P83916 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC5.6□□□□□ -1.51
CBX1P83916 OR3D1P-201ENST00000438288 955 ntBASIC5.6□□□□□ -1.51
CBX1P83916 EMC3-AS1-205ENST00000438698 534 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms