Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ACTBP60709 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.82□□□□□ -1.64
ACTBP60709 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.82□□□□□ -1.64
ACTBP60709 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC4.82□□□□□ -1.64
ACTBP60709 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
ACTBP60709 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC4.82□□□□□ -1.64
ACTBP60709 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
ACTBP60709 AC006206.1-201ENST00000544842 3387 ntBASIC4.82□□□□□ -1.64
ACTBP60709 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ACTBP60709 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
ACTBP60709 ODF3-202ENST00000342593 386 ntTSL 5 BASIC4.82□□□□□ -1.64
ACTBP60709 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
ACTBP60709 BMS1P3-201ENST00000372011 932 ntBASIC4.82□□□□□ -1.64
ACTBP60709 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
ACTBP60709 AC016739.1-201ENST00000405359 345 ntBASIC4.82□□□□□ -1.64
ACTBP60709 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC4.82□□□□□ -1.64
ACTBP60709 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC4.82□□□□□ -1.64
ACTBP60709 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.82□□□□□ -1.64
ACTBP60709 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC4.82□□□□□ -1.64
ACTBP60709 AC007679.3-201ENST00000434035 414 ntBASIC4.82□□□□□ -1.64
ACTBP60709 BMS1P10-201ENST00000443754 1120 ntBASIC4.82□□□□□ -1.64
ACTBP60709 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC4.82□□□□□ -1.64
ACTBP60709 AC097463.1-201ENST00000447288 481 ntBASIC4.82□□□□□ -1.64
ACTBP60709 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC4.82□□□□□ -1.64
ACTBP60709 AC098847.1-201ENST00000473094 348 ntBASIC4.82□□□□□ -1.64
ACTBP60709 DUTP1-201ENST00000493631 470 ntBASIC4.82□□□□□ -1.64
ACTBP60709 HSD3BP3-201ENST00000514706 994 ntBASIC4.82□□□□□ -1.64
ACTBP60709 RFPL4AP3-201ENST00000515267 345 ntBASIC4.82□□□□□ -1.64
ACTBP60709 TMEM97P2-201ENST00000517841 403 ntBASIC4.82□□□□□ -1.64
ACTBP60709 AC009879.1-201ENST00000520029 839 ntBASIC4.82□□□□□ -1.64
ACTBP60709 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.82□□□□□ -1.64
ACTBP60709 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC4.82□□□□□ -1.64
ACTBP60709 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC4.82□□□□□ -1.64
ACTBP60709 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.82□□□□□ -1.64
ACTBP60709 AL137072.1-201ENST00000603444 466 ntBASIC4.82□□□□□ -1.64
ACTBP60709 AC124916.2-201ENST00000604416 224 ntBASIC4.82□□□□□ -1.64
ACTBP60709 AC004801.6-201ENST00000616571 978 ntBASIC4.82□□□□□ -1.64
ACTBP60709 AC091932.2-201ENST00000623014 291 ntBASIC4.82□□□□□ -1.64
ACTBP60709 AL683826.1-201ENST00000624104 627 ntBASIC4.82□□□□□ -1.64
ACTBP60709 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC4.82□□□□□ -1.64
ACTBP60709 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC4.82□□□□□ -1.64
ACTBP60709 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC4.82□□□□□ -1.64
ACTBP60709 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC4.82□□□□□ -1.64
ACTBP60709 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
ACTBP60709 AL359715.3-201ENST00000569267 2123 ntBASIC4.82□□□□□ -1.64
ACTBP60709 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
ACTBP60709 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ACTBP60709 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ACTBP60709 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
ACTBP60709 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
ACTBP60709 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.82□□□□□ -1.64
ACTBP60709 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.81□□□□□ -1.64
ACTBP60709 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
ACTBP60709 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ACTBP60709 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ACTBP60709 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ACTBP60709 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ACTBP60709 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.81□□□□□ -1.64
ACTBP60709 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ACTBP60709 SMG1P4-204ENST00000523028 4131 ntBASIC4.81□□□□□ -1.64
ACTBP60709 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.81□□□□□ -1.64
ACTBP60709 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
ACTBP60709 AC008627.1-201ENST00000517511 1704 ntBASIC4.81□□□□□ -1.64
ACTBP60709 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
ACTBP60709 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ACTBP60709 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ACTBP60709 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.81□□□□□ -1.64
ACTBP60709 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
ACTBP60709 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
ACTBP60709 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
ACTBP60709 SELENOWP1-201ENST00000322792 252 ntBASIC4.81□□□□□ -1.64
ACTBP60709 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.81□□□□□ -1.64
ACTBP60709 RNA5SP326-201ENST00000363209 110 ntBASIC4.81□□□□□ -1.64
ACTBP60709 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ACTBP60709 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
ACTBP60709 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
ACTBP60709 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC4.81□□□□□ -1.64
ACTBP60709 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC4.81□□□□□ -1.64
ACTBP60709 KIF4CP-201ENST00000422742 1279 ntBASIC4.81□□□□□ -1.64
ACTBP60709 MTND6P12-201ENST00000428247 522 ntBASIC4.81□□□□□ -1.64
ACTBP60709 NANOGP9-201ENST00000439890 892 ntBASIC4.81□□□□□ -1.64
ACTBP60709 EIF5AP4-201ENST00000441206 465 ntBASIC4.81□□□□□ -1.64
ACTBP60709 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.81□□□□□ -1.64
ACTBP60709 RBMY2AP-201ENST00000445405 1157 ntBASIC4.81□□□□□ -1.64
ACTBP60709 RBMY2CP-201ENST00000448575 1157 ntBASIC4.81□□□□□ -1.64
ACTBP60709 RBMY2DP-202ENST00000448881 1157 ntBASIC4.81□□□□□ -1.64
ACTBP60709 AL591363.1-201ENST00000450091 483 ntBASIC4.81□□□□□ -1.64
ACTBP60709 RBMY2BP-202ENST00000451071 1156 ntBASIC4.81□□□□□ -1.64
ACTBP60709 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC4.81□□□□□ -1.64
ACTBP60709 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ACTBP60709 RPS4XP12-201ENST00000461747 709 ntBASIC4.81□□□□□ -1.64
ACTBP60709 AC104339.1-201ENST00000465478 348 ntBASIC4.81□□□□□ -1.64
ACTBP60709 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC4.81□□□□□ -1.64
ACTBP60709 OR8A2P-201ENST00000528631 952 ntBASIC4.81□□□□□ -1.64
ACTBP60709 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC4.81□□□□□ -1.64
ACTBP60709 AC084121.1-201ENST00000533882 835 ntBASIC4.81□□□□□ -1.64
ACTBP60709 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC4.81□□□□□ -1.64
ACTBP60709 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC4.81□□□□□ -1.64
ACTBP60709 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC4.81□□□□□ -1.64
ACTBP60709 AL845552.1-201ENST00000556820 323 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms