Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
VSX2P58304 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
VSX2P58304 AL121886.1-201ENST00000358609 435 ntBASIC5.33□□□□□ -1.56
VSX2P58304 RNU4-2-201ENST00000365668 141 ntBASIC5.33□□□□□ -1.56
VSX2P58304 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
VSX2P58304 MIR143-201ENST00000385300 106 ntBASIC5.33□□□□□ -1.56
VSX2P58304 AC005042.1-201ENST00000393397 800 ntBASIC5.33□□□□□ -1.56
VSX2P58304 AL009179.1-201ENST00000406085 265 ntBASIC5.33□□□□□ -1.56
VSX2P58304 RN7SKP279-201ENST00000411383 298 ntBASIC5.33□□□□□ -1.56
VSX2P58304 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.33□□□□□ -1.56
VSX2P58304 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.33□□□□□ -1.56
VSX2P58304 AC019185.1-201ENST00000442718 389 ntBASIC5.33□□□□□ -1.56
VSX2P58304 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.33□□□□□ -1.56
VSX2P58304 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.33□□□□□ -1.56
VSX2P58304 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.33□□□□□ -1.56
VSX2P58304 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.33□□□□□ -1.56
VSX2P58304 RN7SKP99-201ENST00000517028 307 ntBASIC5.33□□□□□ -1.56
VSX2P58304 PMS2P3-207ENST00000529061 717 ntBASIC5.33□□□□□ -1.56
VSX2P58304 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.33□□□□□ -1.56
VSX2P58304 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
VSX2P58304 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.33□□□□□ -1.56
VSX2P58304 AC015720.2-201ENST00000567709 334 ntBASIC5.33□□□□□ -1.56
VSX2P58304 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.33□□□□□ -1.56
VSX2P58304 AC025574.2-201ENST00000615621 514 ntBASIC5.33□□□□□ -1.56
VSX2P58304 AC132068.1-201ENST00000623805 459 ntBASIC5.33□□□□□ -1.56
VSX2P58304 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.33□□□□□ -1.56
VSX2P58304 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
VSX2P58304 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
VSX2P58304 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
VSX2P58304 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
VSX2P58304 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.33□□□□□ -1.56
VSX2P58304 MT-RNR2-201ENST00000387347 1559 ntBASIC5.33□□□□□ -1.56
VSX2P58304 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
VSX2P58304 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.33□□□□□ -1.56
VSX2P58304 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
VSX2P58304 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.32□□□□□ -1.56
VSX2P58304 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.32□□□□□ -1.56
VSX2P58304 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
VSX2P58304 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
VSX2P58304 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
VSX2P58304 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.32□□□□□ -1.56
VSX2P58304 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.32□□□□□ -1.56
VSX2P58304 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
VSX2P58304 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
VSX2P58304 CASC19-248ENST00000641674 1356 ntBASIC5.32□□□□□ -1.56
VSX2P58304 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
VSX2P58304 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
VSX2P58304 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.32□□□□□ -1.56
VSX2P58304 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.32□□□□□ -1.56
VSX2P58304 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
VSX2P58304 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
VSX2P58304 RNA5SP319-201ENST00000362768 119 ntBASIC5.32□□□□□ -1.56
VSX2P58304 MIR551A-201ENST00000385042 96 ntBASIC5.32□□□□□ -1.56
VSX2P58304 NACAP7-201ENST00000407371 609 ntBASIC5.32□□□□□ -1.56
VSX2P58304 OR3A2-201ENST00000408891 1076 ntBASIC5.32□□□□□ -1.56
VSX2P58304 VTI1BP4-201ENST00000427516 527 ntBASIC5.32□□□□□ -1.56
VSX2P58304 BX276092.6-201ENST00000430476 250 ntBASIC5.32□□□□□ -1.56
VSX2P58304 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
VSX2P58304 NANOGP9-201ENST00000439890 892 ntBASIC5.32□□□□□ -1.56
VSX2P58304 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.32□□□□□ -1.56
VSX2P58304 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.32□□□□□ -1.56
VSX2P58304 BX276092.8-201ENST00000455722 250 ntBASIC5.32□□□□□ -1.56
VSX2P58304 EIF3LP3-201ENST00000495197 822 ntBASIC5.32□□□□□ -1.56
VSX2P58304 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
VSX2P58304 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
VSX2P58304 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.32□□□□□ -1.56
VSX2P58304 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.32□□□□□ -1.56
VSX2P58304 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.32□□□□□ -1.56
VSX2P58304 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.32□□□□□ -1.56
VSX2P58304 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.32□□□□□ -1.56
VSX2P58304 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.32□□□□□ -1.56
VSX2P58304 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.32□□□□□ -1.56
VSX2P58304 AL353729.2-201ENST00000605859 1249 ntBASIC5.32□□□□□ -1.56
VSX2P58304 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
VSX2P58304 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
VSX2P58304 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
VSX2P58304 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
VSX2P58304 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.32□□□□□ -1.56
VSX2P58304 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
VSX2P58304 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.32□□□□□ -1.56
VSX2P58304 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.32□□□□□ -1.56
VSX2P58304 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
VSX2P58304 AC097063.1-201ENST00000426714 1797 ntBASIC5.32□□□□□ -1.56
VSX2P58304 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VSX2P58304 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VSX2P58304 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VSX2P58304 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VSX2P58304 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VSX2P58304 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
VSX2P58304 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.31□□□□□ -1.56
VSX2P58304 RN7SKP6-201ENST00000364795 319 ntBASIC5.31□□□□□ -1.56
VSX2P58304 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
VSX2P58304 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VSX2P58304 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.31□□□□□ -1.56
VSX2P58304 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
VSX2P58304 RNF10P1-201ENST00000418589 369 ntBASIC5.31□□□□□ -1.56
VSX2P58304 OR6D1P-201ENST00000436165 939 ntBASIC5.31□□□□□ -1.56
VSX2P58304 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.31□□□□□ -1.56
VSX2P58304 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.31□□□□□ -1.56
VSX2P58304 RANP1-206ENST00000455094 651 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms