Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC6.13□□□□□ -1.43
VCPP55072 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.13□□□□□ -1.43
VCPP55072 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
VCPP55072 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
VCPP55072 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
VCPP55072 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
VCPP55072 U3.10-201ENST00000364459 214 ntBASIC6.13□□□□□ -1.43
VCPP55072 MIR223-201ENST00000385204 110 ntBASIC6.13□□□□□ -1.43
VCPP55072 AL139128.1-201ENST00000413921 941 ntBASIC6.13□□□□□ -1.43
VCPP55072 AC117434.1-201ENST00000419971 836 ntBASIC6.13□□□□□ -1.43
VCPP55072 AC099677.3-201ENST00000427081 395 ntBASIC6.13□□□□□ -1.43
VCPP55072 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.13□□□□□ -1.43
VCPP55072 AL445928.1-201ENST00000435545 222 ntBASIC6.13□□□□□ -1.43
VCPP55072 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
VCPP55072 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC6.13□□□□□ -1.43
VCPP55072 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.13□□□□□ -1.43
VCPP55072 FRG2FP-204ENST00000453982 852 ntBASIC6.13□□□□□ -1.43
VCPP55072 RPL35AP19-201ENST00000469425 329 ntBASIC6.13□□□□□ -1.43
VCPP55072 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
VCPP55072 RPL7AP6-201ENST00000477943 801 ntBASIC6.13□□□□□ -1.43
VCPP55072 AC093267.1-201ENST00000489176 961 ntBASIC6.13□□□□□ -1.43
VCPP55072 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
VCPP55072 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.13□□□□□ -1.43
VCPP55072 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC6.13□□□□□ -1.43
VCPP55072 ASNSP4-201ENST00000511103 447 ntBASIC6.13□□□□□ -1.43
VCPP55072 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC6.13□□□□□ -1.43
VCPP55072 AC078899.1-201ENST00000521432 1185 ntBASIC6.13□□□□□ -1.43
VCPP55072 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC6.13□□□□□ -1.43
VCPP55072 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.13□□□□□ -1.43
VCPP55072 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC6.13□□□□□ -1.43
VCPP55072 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.13□□□□□ -1.43
VCPP55072 GSTP1P1-201ENST00000548078 319 ntBASIC6.13□□□□□ -1.43
VCPP55072 AC126615.2-201ENST00000553003 515 ntBASIC6.13□□□□□ -1.43
VCPP55072 AL049872.1-201ENST00000556323 322 ntBASIC6.13□□□□□ -1.43
VCPP55072 TXNP4-201ENST00000575018 310 ntBASIC6.13□□□□□ -1.43
VCPP55072 AC060780.2-201ENST00000589047 198 ntBASIC6.13□□□□□ -1.43
VCPP55072 AL049539.1-201ENST00000611964 459 ntBASIC6.13□□□□□ -1.43
VCPP55072 AC100827.5-201ENST00000615883 426 ntBASIC6.13□□□□□ -1.43
VCPP55072 AC005840.5-201ENST00000619166 599 ntBASIC6.13□□□□□ -1.43
VCPP55072 AP001784.1-201ENST00000624107 428 ntBASIC6.13□□□□□ -1.43
VCPP55072 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.13□□□□□ -1.43
VCPP55072 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
VCPP55072 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
VCPP55072 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
VCPP55072 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC6.13□□□□□ -1.43
VCPP55072 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.13□□□□□ -1.43
VCPP55072 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
VCPP55072 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
VCPP55072 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.13□□□□□ -1.43
VCPP55072 AC004656.1-201ENST00000568479 4951 ntBASIC6.13□□□□□ -1.43
VCPP55072 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
VCPP55072 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.12□□□□□ -1.43
VCPP55072 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
VCPP55072 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
VCPP55072 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
VCPP55072 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
VCPP55072 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
VCPP55072 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.12□□□□□ -1.43
VCPP55072 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
VCPP55072 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC6.12□□□□□ -1.43
VCPP55072 CYP4Z2P-201ENST00000423332 1512 ntBASIC6.12□□□□□ -1.43
VCPP55072 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.12□□□□□ -1.43
VCPP55072 VDAC1P6-201ENST00000430062 855 ntBASIC6.12□□□□□ -1.43
VCPP55072 AL663074.2-201ENST00000440621 479 ntBASIC6.12□□□□□ -1.43
VCPP55072 AC009220.1-201ENST00000451614 275 ntBASIC6.12□□□□□ -1.43
VCPP55072 RN7SL172P-201ENST00000460535 303 ntBASIC6.12□□□□□ -1.43
VCPP55072 AC114982.2-201ENST00000461396 358 ntBASIC6.12□□□□□ -1.43
VCPP55072 RPS4XP1-201ENST00000482189 787 ntBASIC6.12□□□□□ -1.43
VCPP55072 SUMO2P4-201ENST00000504193 276 ntBASIC6.12□□□□□ -1.43
VCPP55072 AC024558.1-201ENST00000505008 528 ntBASIC6.12□□□□□ -1.43
VCPP55072 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
VCPP55072 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.12□□□□□ -1.43
VCPP55072 AC026782.2-201ENST00000510845 636 ntBASIC6.12□□□□□ -1.43
VCPP55072 CDC42P3-201ENST00000518493 633 ntBASIC6.12□□□□□ -1.43
VCPP55072 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
VCPP55072 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
VCPP55072 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC6.12□□□□□ -1.43
VCPP55072 OR4A42P-201ENST00000531397 938 ntBASIC6.12□□□□□ -1.43
VCPP55072 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC6.12□□□□□ -1.43
VCPP55072 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
VCPP55072 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
VCPP55072 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.12□□□□□ -1.43
VCPP55072 CR383656.6-201ENST00000550518 394 ntBASIC6.12□□□□□ -1.43
VCPP55072 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
VCPP55072 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
VCPP55072 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.12□□□□□ -1.43
VCPP55072 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.12□□□□□ -1.43
VCPP55072 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.12□□□□□ -1.43
VCPP55072 AL163952.1-202ENST00000569625 600 ntBASIC6.12□□□□□ -1.43
VCPP55072 GARSP1-201ENST00000570895 719 ntBASIC6.12□□□□□ -1.43
VCPP55072 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.12□□□□□ -1.43
VCPP55072 MIR4436B2-201ENST00000581415 91 ntBASIC6.12□□□□□ -1.43
VCPP55072 MIR4436B1-201ENST00000583272 91 ntBASIC6.12□□□□□ -1.43
VCPP55072 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
VCPP55072 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
VCPP55072 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.12□□□□□ -1.43
VCPP55072 IGLCOR22-2-201ENST00000605398 313 ntBASIC6.12□□□□□ -1.43
VCPP55072 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC6.12□□□□□ -1.43
VCPP55072 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC6.12□□□□□ -1.43
VCPP55072 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms