Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 OR6E1P-201ENST00000414424 923 ntBASIC5.84□□□□□ -1.47
LIMK1P53667 CYP4F30P-202ENST00000420048 405 ntBASIC5.84□□□□□ -1.47
LIMK1P53667 RPS15AP30-201ENST00000420976 390 ntBASIC5.84□□□□□ -1.47
LIMK1P53667 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
LIMK1P53667 VN1R54P-201ENST00000435210 1049 ntBASIC5.84□□□□□ -1.47
LIMK1P53667 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC5.84□□□□□ -1.47
LIMK1P53667 OR7E116P-201ENST00000448529 957 ntBASIC5.84□□□□□ -1.47
LIMK1P53667 RN7SL72P-201ENST00000460697 269 ntBASIC5.84□□□□□ -1.47
LIMK1P53667 AL355032.1-201ENST00000472981 438 ntBASIC5.84□□□□□ -1.47
LIMK1P53667 AC022215.1-201ENST00000481770 362 ntBASIC5.84□□□□□ -1.47
LIMK1P53667 AC008953.1-201ENST00000497334 318 ntBASIC5.84□□□□□ -1.47
LIMK1P53667 NRBF2P4-201ENST00000520874 850 ntBASIC5.84□□□□□ -1.47
LIMK1P53667 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC5.84□□□□□ -1.47
LIMK1P53667 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.84□□□□□ -1.47
LIMK1P53667 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.84□□□□□ -1.47
LIMK1P53667 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.84□□□□□ -1.47
LIMK1P53667 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5.84□□□□□ -1.47
LIMK1P53667 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.84□□□□□ -1.47
LIMK1P53667 MIR4675-201ENST00000577898 77 ntBASIC5.84□□□□□ -1.47
LIMK1P53667 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.84□□□□□ -1.47
LIMK1P53667 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.84□□□□□ -1.47
LIMK1P53667 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.84□□□□□ -1.47
LIMK1P53667 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.84□□□□□ -1.47
LIMK1P53667 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.84□□□□□ -1.47
LIMK1P53667 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
LIMK1P53667 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
LIMK1P53667 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
LIMK1P53667 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
LIMK1P53667 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
LIMK1P53667 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.48
LIMK1P53667 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
LIMK1P53667 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
LIMK1P53667 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.48
LIMK1P53667 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.83□□□□□ -1.48
LIMK1P53667 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.83□□□□□ -1.48
LIMK1P53667 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
LIMK1P53667 AC010329.1-201ENST00000593903 8328 ntBASIC5.83□□□□□ -1.48
LIMK1P53667 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LIMK1P53667 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
LIMK1P53667 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
LIMK1P53667 AC026951.1-201ENST00000559530 2459 ntBASIC5.83□□□□□ -1.48
LIMK1P53667 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LIMK1P53667 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
LIMK1P53667 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LIMK1P53667 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
LIMK1P53667 RNA5SP375-201ENST00000362975 119 ntBASIC5.83□□□□□ -1.48
LIMK1P53667 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LIMK1P53667 AC009804.1-201ENST00000400949 179 ntBASIC5.83□□□□□ -1.48
LIMK1P53667 RN7SKP213-201ENST00000410746 298 ntBASIC5.83□□□□□ -1.48
LIMK1P53667 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LIMK1P53667 AC007562.1-201ENST00000421819 517 ntBASIC5.83□□□□□ -1.48
LIMK1P53667 HMGB3P10-201ENST00000434734 572 ntBASIC5.83□□□□□ -1.48
LIMK1P53667 AC023274.2-201ENST00000445264 521 ntBASIC5.83□□□□□ -1.48
LIMK1P53667 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.83□□□□□ -1.48
LIMK1P53667 RSL24D1P2-201ENST00000445584 366 ntBASIC5.83□□□□□ -1.48
LIMK1P53667 RAD1P2-201ENST00000446414 663 ntBASIC5.83□□□□□ -1.48
LIMK1P53667 CBX1P2-201ENST00000453841 458 ntBASIC5.83□□□□□ -1.48
LIMK1P53667 AC103563.5-201ENST00000455643 364 ntBASIC5.83□□□□□ -1.48
LIMK1P53667 RPS23P6-201ENST00000466136 431 ntBASIC5.83□□□□□ -1.48
LIMK1P53667 RN7SL547P-201ENST00000490793 290 ntBASIC5.83□□□□□ -1.48
LIMK1P53667 OR7E157P-201ENST00000494376 911 ntBASIC5.83□□□□□ -1.48
LIMK1P53667 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.83□□□□□ -1.48
LIMK1P53667 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.83□□□□□ -1.48
LIMK1P53667 RNA5SP228-201ENST00000516232 133 ntBASIC5.83□□□□□ -1.48
LIMK1P53667 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.83□□□□□ -1.48
LIMK1P53667 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
LIMK1P53667 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.83□□□□□ -1.48
LIMK1P53667 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.83□□□□□ -1.48
LIMK1P53667 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LIMK1P53667 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.83□□□□□ -1.48
LIMK1P53667 AC015720.2-201ENST00000567709 334 ntBASIC5.83□□□□□ -1.48
LIMK1P53667 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.83□□□□□ -1.48
LIMK1P53667 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LIMK1P53667 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.83□□□□□ -1.48
LIMK1P53667 AC141002.1-201ENST00000607025 279 ntBASIC5.83□□□□□ -1.48
LIMK1P53667 AC024255.1-201ENST00000614376 102 ntBASIC5.83□□□□□ -1.48
LIMK1P53667 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC5.83□□□□□ -1.48
LIMK1P53667 AC022726.2-201ENST00000634673 547 ntBASIC5.83□□□□□ -1.48
LIMK1P53667 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.83□□□□□ -1.48
LIMK1P53667 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC5.83□□□□□ -1.48
LIMK1P53667 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
LIMK1P53667 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.83□□□□□ -1.48
LIMK1P53667 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LIMK1P53667 SAMMSON-213ENST00000641336 1521 ntBASIC5.83□□□□□ -1.48
LIMK1P53667 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
LIMK1P53667 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
LIMK1P53667 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
LIMK1P53667 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LIMK1P53667 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.82□□□□□ -1.48
LIMK1P53667 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
LIMK1P53667 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LIMK1P53667 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.82□□□□□ -1.48
LIMK1P53667 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LIMK1P53667 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
LIMK1P53667 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
LIMK1P53667 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LIMK1P53667 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
LIMK1P53667 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
LIMK1P53667 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.82□□□□□ -1.48
LIMK1P53667 FABP12P1-201ENST00000401911 322 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms