Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC5.31□□□□□ -1.56
SOX2P48431 AL158214.1-201ENST00000444423 404 ntBASIC5.31□□□□□ -1.56
SOX2P48431 Z77249.1-201ENST00000444622 1175 ntBASIC5.31□□□□□ -1.56
SOX2P48431 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.31□□□□□ -1.56
SOX2P48431 AL157827.1-201ENST00000447622 132 ntBASIC5.31□□□□□ -1.56
SOX2P48431 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC5.31□□□□□ -1.56
SOX2P48431 CYCSP42-201ENST00000450823 238 ntBASIC5.31□□□□□ -1.56
SOX2P48431 SLAMF6P1-201ENST00000451067 602 ntBASIC5.31□□□□□ -1.56
SOX2P48431 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.31□□□□□ -1.56
SOX2P48431 AC093719.1-201ENST00000480427 441 ntBASIC5.31□□□□□ -1.56
SOX2P48431 AC012123.2-201ENST00000485809 248 ntBASIC5.31□□□□□ -1.56
SOX2P48431 RPL5P33-201ENST00000487833 905 ntBASIC5.31□□□□□ -1.56
SOX2P48431 SUMO2P4-201ENST00000504193 276 ntBASIC5.31□□□□□ -1.56
SOX2P48431 PSMA2P2-201ENST00000504319 686 ntBASIC5.31□□□□□ -1.56
SOX2P48431 OR4D12P-201ENST00000509361 911 ntBASIC5.31□□□□□ -1.56
SOX2P48431 GAPDHP71-201ENST00000511530 1003 ntBASIC5.31□□□□□ -1.56
SOX2P48431 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC5.31□□□□□ -1.56
SOX2P48431 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
SOX2P48431 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
SOX2P48431 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.31□□□□□ -1.56
SOX2P48431 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC5.31□□□□□ -1.56
SOX2P48431 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.31□□□□□ -1.56
SOX2P48431 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC5.31□□□□□ -1.56
SOX2P48431 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
SOX2P48431 AC244502.2-201ENST00000543361 851 ntBASIC5.31□□□□□ -1.56
SOX2P48431 AC008055.1-201ENST00000547032 609 ntBASIC5.31□□□□□ -1.56
SOX2P48431 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.31□□□□□ -1.56
SOX2P48431 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SOX2P48431 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.31□□□□□ -1.56
SOX2P48431 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.31□□□□□ -1.56
SOX2P48431 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.31□□□□□ -1.56
SOX2P48431 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.31□□□□□ -1.56
SOX2P48431 AP001357.1-201ENST00000586304 1053 ntBASIC5.31□□□□□ -1.56
SOX2P48431 AC090241.1-201ENST00000587732 621 ntBASIC5.31□□□□□ -1.56
SOX2P48431 Z82195.1-201ENST00000604558 398 ntBASIC5.31□□□□□ -1.56
SOX2P48431 AC073387.2-201ENST00000604797 784 ntBASIC5.31□□□□□ -1.56
SOX2P48431 AC008555.7-201ENST00000605008 583 ntBASIC5.31□□□□□ -1.56
SOX2P48431 Z99289.3-201ENST00000605586 594 ntBASIC5.31□□□□□ -1.56
SOX2P48431 AC106052.1-201ENST00000608029 497 ntBASIC5.31□□□□□ -1.56
SOX2P48431 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.31□□□□□ -1.56
SOX2P48431 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.31□□□□□ -1.56
SOX2P48431 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.31□□□□□ -1.56
SOX2P48431 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SOX2P48431 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SOX2P48431 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.31□□□□□ -1.56
SOX2P48431 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SOX2P48431 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
SOX2P48431 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SOX2P48431 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SOX2P48431 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
SOX2P48431 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SOX2P48431 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SOX2P48431 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
SOX2P48431 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
SOX2P48431 AC016583.1-201ENST00000624221 2431 ntBASIC5.31□□□□□ -1.56
SOX2P48431 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SOX2P48431 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.3□□□□□ -1.56
SOX2P48431 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
SOX2P48431 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SOX2P48431 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.3□□□□□ -1.56
SOX2P48431 BCORP1-203ENST00000513194 5093 ntBASIC5.3□□□□□ -1.56
SOX2P48431 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SOX2P48431 AC024651.2-201ENST00000562480 2098 ntBASIC5.3□□□□□ -1.56
SOX2P48431 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
SOX2P48431 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SOX2P48431 FBXL21-201ENST00000297158 1305 ntBASIC5.3□□□□□ -1.56
SOX2P48431 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SOX2P48431 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.3□□□□□ -1.56
SOX2P48431 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
SOX2P48431 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.3□□□□□ -1.56
SOX2P48431 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.3□□□□□ -1.56
SOX2P48431 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
SOX2P48431 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SOX2P48431 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SOX2P48431 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SOX2P48431 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SOX2P48431 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.3□□□□□ -1.56
SOX2P48431 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SOX2P48431 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC5.3□□□□□ -1.56
SOX2P48431 AP003385.1-201ENST00000426387 893 ntBASIC5.3□□□□□ -1.56
SOX2P48431 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC5.3□□□□□ -1.56
SOX2P48431 USP9YP24-201ENST00000434374 697 ntBASIC5.3□□□□□ -1.56
SOX2P48431 Z84478.1-201ENST00000438230 1219 ntBASIC5.3□□□□□ -1.56
SOX2P48431 NANOGP9-201ENST00000439890 892 ntBASIC5.3□□□□□ -1.56
SOX2P48431 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC5.3□□□□□ -1.56
SOX2P48431 AC245047.2-201ENST00000441060 530 ntBASIC5.3□□□□□ -1.56
SOX2P48431 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.3□□□□□ -1.56
SOX2P48431 CUBNP2-201ENST00000443534 1139 ntBASIC5.3□□□□□ -1.56
SOX2P48431 USP9YP17-201ENST00000444617 696 ntBASIC5.3□□□□□ -1.56
SOX2P48431 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.3□□□□□ -1.56
SOX2P48431 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.3□□□□□ -1.56
SOX2P48431 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.3□□□□□ -1.56
SOX2P48431 RPL23AP60-201ENST00000450011 454 ntBASIC5.3□□□□□ -1.56
SOX2P48431 AL133351.3-201ENST00000454998 193 ntBASIC5.3□□□□□ -1.56
SOX2P48431 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.3□□□□□ -1.56
SOX2P48431 ACA64.4-201ENST00000459070 127 ntBASIC5.3□□□□□ -1.56
SOX2P48431 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SOX2P48431 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC5.3□□□□□ -1.56
SOX2P48431 CCDC11P1-201ENST00000503137 1162 ntBASIC5.3□□□□□ -1.56
SOX2P48431 ST13P12-201ENST00000508958 1094 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms