Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AC019131.2-201ENST00000609071 870 ntBASIC5.63□□□□□ -1.51
HNF4AP41235 MIR6793-201ENST00000612376 63 ntBASIC5.63□□□□□ -1.51
HNF4AP41235 AC002044.3-201ENST00000623314 541 ntBASIC5.63□□□□□ -1.51
HNF4AP41235 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC5.63□□□□□ -1.51
HNF4AP41235 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.63□□□□□ -1.51
HNF4AP41235 SAMMSON-209ENST00000641222 1100 ntBASIC5.63□□□□□ -1.51
HNF4AP41235 AC027088.4-201ENST00000611559 1947 ntBASIC5.63□□□□□ -1.51
HNF4AP41235 AC117409.1-201ENST00000470499 1310 ntBASIC5.63□□□□□ -1.51
HNF4AP41235 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HNF4AP41235 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.63□□□□□ -1.51
HNF4AP41235 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HNF4AP41235 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HNF4AP41235 TRIM51GP-201ENST00000534741 1350 ntBASIC5.63□□□□□ -1.51
HNF4AP41235 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HNF4AP41235 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.63□□□□□ -1.51
HNF4AP41235 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.63□□□□□ -1.51
HNF4AP41235 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.63□□□□□ -1.51
HNF4AP41235 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.63□□□□□ -1.51
HNF4AP41235 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.63□□□□□ -1.51
HNF4AP41235 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HNF4AP41235 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
HNF4AP41235 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
HNF4AP41235 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.63□□□□□ -1.51
HNF4AP41235 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.63□□□□□ -1.51
HNF4AP41235 AC110792.3-201ENST00000595906 1614 ntBASIC5.63□□□□□ -1.51
HNF4AP41235 AC010266.2-201ENST00000564741 3255 ntBASIC5.63□□□□□ -1.51
HNF4AP41235 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
HNF4AP41235 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
HNF4AP41235 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HNF4AP41235 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.62□□□□□ -1.51
HNF4AP41235 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.62□□□□□ -1.51
HNF4AP41235 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
HNF4AP41235 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.62□□□□□ -1.51
HNF4AP41235 AC109446.4-201ENST00000623235 2755 ntBASIC5.62□□□□□ -1.51
HNF4AP41235 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HNF4AP41235 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HNF4AP41235 RNA5SP477-201ENST00000362639 119 ntBASIC5.62□□□□□ -1.51
HNF4AP41235 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.62□□□□□ -1.51
HNF4AP41235 SNORD65-201ENST00000391079 73 ntBASIC5.62□□□□□ -1.51
HNF4AP41235 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.62□□□□□ -1.51
HNF4AP41235 MTCYBP7-201ENST00000419540 1134 ntBASIC5.62□□□□□ -1.51
HNF4AP41235 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.62□□□□□ -1.51
HNF4AP41235 BX323845.3-201ENST00000428215 527 ntBASIC5.62□□□□□ -1.51
HNF4AP41235 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.62□□□□□ -1.51
HNF4AP41235 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HNF4AP41235 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.62□□□□□ -1.51
HNF4AP41235 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.62□□□□□ -1.51
HNF4AP41235 NDUFS5P5-201ENST00000437256 321 ntBASIC5.62□□□□□ -1.51
HNF4AP41235 VN1R110P-201ENST00000438988 971 ntBASIC5.62□□□□□ -1.51
HNF4AP41235 EIF5AP4-201ENST00000441206 465 ntBASIC5.62□□□□□ -1.51
HNF4AP41235 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.62□□□□□ -1.51
HNF4AP41235 BUD31P2-201ENST00000449374 300 ntBASIC5.62□□□□□ -1.51
HNF4AP41235 NPM1P39-201ENST00000449818 867 ntBASIC5.62□□□□□ -1.51
HNF4AP41235 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.62□□□□□ -1.51
HNF4AP41235 RPL12P39-201ENST00000455456 496 ntBASIC5.62□□□□□ -1.51
HNF4AP41235 AC004129.2-201ENST00000457229 287 ntBASIC5.62□□□□□ -1.51
HNF4AP41235 AL157777.1-201ENST00000468100 304 ntBASIC5.62□□□□□ -1.51
HNF4AP41235 LARP7P4-201ENST00000481075 878 ntBASIC5.62□□□□□ -1.51
HNF4AP41235 RN7SL57P-201ENST00000493687 290 ntBASIC5.62□□□□□ -1.51
HNF4AP41235 ATG10-AS1-201ENST00000504846 648 ntBASIC5.62□□□□□ -1.51
HNF4AP41235 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HNF4AP41235 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.62□□□□□ -1.51
HNF4AP41235 AC022784.5-201ENST00000522241 437 ntBASIC5.62□□□□□ -1.51
HNF4AP41235 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.62□□□□□ -1.51
HNF4AP41235 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.62□□□□□ -1.51
HNF4AP41235 PCNAP4-201ENST00000532690 730 ntBASIC5.62□□□□□ -1.51
HNF4AP41235 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.62□□□□□ -1.51
HNF4AP41235 AC126615.2-201ENST00000553003 515 ntBASIC5.62□□□□□ -1.51
HNF4AP41235 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.62□□□□□ -1.51
HNF4AP41235 AC067773.1-201ENST00000603284 1094 ntBASIC5.62□□□□□ -1.51
HNF4AP41235 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.62□□□□□ -1.51
HNF4AP41235 AL133370.2-201ENST00000619934 439 ntBASIC5.62□□□□□ -1.51
HNF4AP41235 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.62□□□□□ -1.51
HNF4AP41235 MFSD8-219ENST00000641228 2559 ntBASIC5.62□□□□□ -1.51
HNF4AP41235 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HNF4AP41235 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.62□□□□□ -1.51
HNF4AP41235 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HNF4AP41235 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HNF4AP41235 UGT2B26P-201ENST00000508672 1613 ntBASIC5.62□□□□□ -1.51
HNF4AP41235 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
HNF4AP41235 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.62□□□□□ -1.51
HNF4AP41235 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HNF4AP41235 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
HNF4AP41235 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.62□□□□□ -1.51
HNF4AP41235 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
HNF4AP41235 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.62□□□□□ -1.51
HNF4AP41235 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HNF4AP41235 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
HNF4AP41235 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HNF4AP41235 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.61□□□□□ -1.51
HNF4AP41235 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HNF4AP41235 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HNF4AP41235 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
HNF4AP41235 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HNF4AP41235 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
HNF4AP41235 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.61□□□□□ -1.51
HNF4AP41235 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HNF4AP41235 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
HNF4AP41235 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HNF4AP41235 SUGT1P2-201ENST00000379452 992 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms